UPC: distributed shared memory programming

por El-Ghazawi, Tarek, Carlson, William Dwight, Sterling, Thomas, Yelick, Katherine
Publicado 2001

ADEPT: a domain independent sequence alignment strategy for gpu architectures

por Awan, Muaaz G., Deslippe, Jack, Buluc, Aydin, Selvitopi, Oguz, Hofmeyr, Steven, Oliker, Leonid, Yelick, Katherine
Publicado 2020

The parallelism motifs of genomic data analysis

por Yelick, Katherine, Buluç, Aydın, Awan, Muaaz, Azad, Ariful, Brock, Benjamin, Egan, Rob, Ekanayake, Saliya, Ellis, Marquita, Georganas, Evangelos, Guidi, Giulia, Hofmeyr, Steven, Selvitopi, Oguz, Teodoropol, Cristina, Oliker, Leonid
Publicado 2020

Terabase-scale metagenome coassembly with MetaHipMer

por Hofmeyr, Steven, Egan, Rob, Georganas, Evangelos, Copeland, Alex C., Riley, Robert, Clum, Alicia, Eloe-Fadrosh, Emiley, Roux, Simon, Goltsman, Eugene, Buluç, Aydın, Rokhsar, Daniel, Oliker, Leonid, Yelick, Katherine
Publicado 2020

Terabase-Scale Coassembly of a Tropical Soil Microbiome

por Riley, Robert, Bowers, Robert M., Camargo, Antonio Pedro, Campbell, Ashley, Egan, Rob, Eloe-Fadrosh, Emiley A., Foster, Brian, Hofmeyr, Steven, Huntemann, Marcel, Kellom, Matthew, Kimbrel, Jeffrey A., Oliker, Leonid, Yelick, Katherine, Pett-Ridge, Jennifer, Salamov, Asaf, Varghese, Neha J., Clum, Alicia
Publicado 2023

A whole-genome shotgun approach for assembling and anchoring the hexaploid bread wheat genome

por Chapman, Jarrod A, Mascher, Martin, Buluç, Aydın, Barry, Kerrie, Georganas, Evangelos, Session, Adam, Strnadova, Veronika, Jenkins, Jerry, Sehgal, Sunish, Oliker, Leonid, Schmutz, Jeremy, Yelick, Katherine A, Scholz, Uwe, Waugh, Robbie, Poland, Jesse A, Muehlbauer, Gary J, Stein, Nils, Rokhsar, Daniel S
Publicado 2015

Exascale applications: skin in the game

por Alexander, Francis, Almgren, Ann, Bell, John, Bhattacharjee, Amitava, Chen, Jacqueline, Colella, Phil, Daniel, David, DeSlippe, Jack, Diachin, Lori, Draeger, Erik, Dubey, Anshu, Dunning, Thom, Evans, Thomas, Foster, Ian, Francois, Marianne, Germann, Tim, Gordon, Mark, Habib, Salman, Halappanavar, Mahantesh, Hamilton, Steven, Hart, William, (Henry) Huang, Zhenyu, Hungerford, Aimee, Kasen, Daniel, Kent, Paul R. C., Kolev, Tzanio, Kothe, Douglas B., Kronfeld, Andreas, Luo, Ye, Mackenzie, Paul, McCallen, David, Messer, Bronson, Mniszewski, Sue, Oehmen, Chris, Perazzo, Amedeo, Perez, Danny, Richards, David, Rider, William J., Rieben, Rob, Roche, Kenneth, Siegel, Andrew, Sprague, Michael, Steefel, Carl, Stevens, Rick, Syamlal, Madhava, Taylor, Mark, Turner, John, Vay, Jean-Luc, Voter, Artur F., Windus, Theresa L., Yelick, Katherine
Publicado 2020

Critical Assessment of Metagenome Interpretation: the second round of challenges

por Meyer, Fernando, Fritz, Adrian, Deng, Zhi-Luo, Koslicki, David, Lesker, Till Robin, Gurevich, Alexey, Robertson, Gary, Alser, Mohammed, Antipov, Dmitry, Beghini, Francesco, Bertrand, Denis, Brito, Jaqueline J., Brown, C. Titus, Buchmann, Jan, Buluç, Aydin, Chen, Bo, Chikhi, Rayan, Clausen, Philip T. L. C., Cristian, Alexandru, Dabrowski, Piotr Wojciech, Darling, Aaron E., Egan, Rob, Eskin, Eleazar, Georganas, Evangelos, Goltsman, Eugene, Gray, Melissa A., Hansen, Lars Hestbjerg, Hofmeyr, Steven, Huang, Pingqin, Irber, Luiz, Jia, Huijue, Jørgensen, Tue Sparholt, Kieser, Silas D., Klemetsen, Terje, Kola, Axel, Kolmogorov, Mikhail, Korobeynikov, Anton, Kwan, Jason, LaPierre, Nathan, Lemaitre, Claire, Li, Chenhao, Limasset, Antoine, Malcher-Miranda, Fabio, Mangul, Serghei, Marcelino, Vanessa R., Marchet, Camille, Marijon, Pierre, Meleshko, Dmitry, Mende, Daniel R., Milanese, Alessio, Nagarajan, Niranjan, Nissen, Jakob, Nurk, Sergey, Oliker, Leonid, Paoli, Lucas, Peterlongo, Pierre, Piro, Vitor C., Porter, Jacob S., Rasmussen, Simon, Rees, Evan R., Reinert, Knut, Renard, Bernhard, Robertsen, Espen Mikal, Rosen, Gail L., Ruscheweyh, Hans-Joachim, Sarwal, Varuni, Segata, Nicola, Seiler, Enrico, Shi, Lizhen, Sun, Fengzhu, Sunagawa, Shinichi, Sørensen, Søren Johannes, Thomas, Ashleigh, Tong, Chengxuan, Trajkovski, Mirko, Tremblay, Julien, Uritskiy, Gherman, Vicedomini, Riccardo, Wang, Zhengyang, Wang, Ziye, Wang, Zhong, Warren, Andrew, Willassen, Nils Peder, Yelick, Katherine, You, Ronghui, Zeller, Georg, Zhao, Zhengqiao, Zhu, Shanfeng, Zhu, Jie, Garrido-Oter, Ruben, Gastmeier, Petra, Hacquard, Stephane, Häußler, Susanne, Khaledi, Ariane, Maechler, Friederike, Mesny, Fantin, Radutoiu, Simona, Schulze-Lefert, Paul, Smit, Nathiana, Strowig, Till, Bremges, Andreas, Sczyrba, Alexander, McHardy, Alice Carolyn
Publicado 2022