Gene network inference by probabilistic scoring of relationships from a factorized model of interactions

por Žitnik, Marinka, Zupan, Blaž
Publicado 2014

Gene network inference by fusing data from diverse distributions

por Žitnik, Marinka, Zupan, Blaž
Publicado 2015

Jumping across biomedical contexts using compressive data fusion

por Zitnik, Marinka, Zupan, Blaz
Publicado 2016

Predicting multicellular function through multi-layer tissue networks

por Zitnik, Marinka, Leskovec, Jure
Publicado 2017

Scalable non-negative matrix tri-factorization

por Čopar, Andrej, žitnik, Marinka, Zupan, Blaž
Publicado 2017

Modeling polypharmacy side effects with graph convolutional networks

por Zitnik, Marinka, Agrawal, Monica, Leskovec, Jure
Publicado 2018

Prioritizing network communities

por Zitnik, Marinka, Sosič, Rok, Leskovec, Jure
Publicado 2018

Fast optimization of non-negative matrix tri-factorization

por Čopar, Andrej, Zupan, Blaž, Zitnik, Marinka
Publicado 2019

Identification of disease treatment mechanisms through the multiscale interactome

por Ruiz, Camilo, Zitnik, Marinka, Leskovec, Jure
Publicado 2021

Building a knowledge graph to enable precision medicine

por Chandak, Payal, Huang, Kexin, Zitnik, Marinka
Publicado 2023

Evaluating explainability for graph neural networks

por Agarwal, Chirag, Queen, Owen, Lakkaraju, Himabindu, Zitnik, Marinka
Publicado 2023

Sieve-based relation extraction of gene regulatory networks from biological literature

por Žitnik, Slavko, Žitnik, Marinka, Zupan, Blaž, Bajec, Marko
Publicado 2015

Evolution of resilience in protein interactomes across the tree of life

por Zitnik, Marinka, Sosič, Rok, Feldman, Marcus W., Leskovec, Jure
Publicado 2019

Discovering disease-disease associations by fusing systems-level molecular data

por Žitnik, Marinka, Janjić, Vuk, Larminie, Chris, Zupan, Blaž, Pržulj, Nataša
Publicado 2013

Orthogonal matrix factorization enables integrative analysis of multiple RNA binding proteins

por Stražar, Martin, Žitnik, Marinka, Zupan, Blaž, Ule, Jernej, Curk, Tomaž
Publicado 2016

Metapaths: similarity search in heterogeneous knowledge graphs via meta-paths

por Noori, Ayush, Li, Michelle M, Tan, Amelia L M, Zitnik, Marinka
Publicado 2023

SkipGNN: predicting molecular interactions with skip-graph networks

por Huang, Kexin, Xiao, Cao, Glass, Lucas M., Zitnik, Marinka, Sun, Jimeng
Publicado 2020

Co-evolution based machine-learning for predicting functional interactions between human genes

por Stupp, Doron, Sharon, Elad, Bloch, Idit, Zitnik, Marinka, Zuk, Or, Tabach, Yuval
Publicado 2021

To Embed or Not: Network Embedding as a Paradigm in Computational Biology

por Nelson, Walter, Zitnik, Marinka, Wang, Bo, Leskovec, Jure, Goldenberg, Anna, Sharan, Roded
Publicado 2019

Gene Prioritization by Compressive Data Fusion and Chaining

por Žitnik, Marinka, Nam, Edward A., Dinh, Christopher, Kuspa, Adam, Shaulsky, Gad, Zupan, Blaž
Publicado 2015