Supervised learning using routine surveillance data improves outbreak detection of Salmonella and Campylobacter infections in Germany

por Zacher, Benedikt, Czogiel, Irina
Publicado 2022

Supervised Learning for Automated Infectious-Disease-Outbreak Detection

por Zacher, Benedikt, Ullrich, Alexander, Ghozzi, Stephane
Publicado 2019

Starr: Simple Tiling ARRay analysis of Affymetrix ChIP-chip data

por Zacher, Benedikt, Kuan, Pei Fen, Tresch, Achim
Publicado 2010

Annotation of genomics data using bidirectional hidden Markov models unveils variations in Pol II transcription cycle

por Zacher, Benedikt, Lidschreiber, Michael, Cramer, Patrick, Gagneur, Julien, Tresch, Achim
Publicado 2014

Simultaneous characterization of sense and antisense genomic processes by the double-stranded hidden Markov model

por Glas, Julia, Dümcke, Sebastian, Zacher, Benedikt, Poron, Don, Gagneur, Julien, Tresch, Achim
Publicado 2016

Accurate Promoter and Enhancer Identification in 127 ENCODE and Roadmap Epigenomics Cell Types and Tissues by GenoSTAN

por Zacher, Benedikt, Michel, Margaux, Schwalb, Björn, Cramer, Patrick, Tresch, Achim, Gagneur, Julien
Publicado 2017

Nosokomiale Infektionen und Antibiotikaanwendung in Langzeitpflegeeinrichtungen. Deutsche Ergebnisse der dritten europäischen Punkt-Prävalenz-Erhebung HALT-3

por Schmidt, Nicole, Marujo, Vanda, Eckmanns, Tim, Zacher, Benedikt, Arvand, Mardjan, Ruscher, Claudia
Publicado 2022

Modelling and simulating generic RNA-Seq experiments with the flux simulator

por Griebel, Thasso, Zacher, Benedikt, Ribeca, Paolo, Raineri, Emanuele, Lacroix, Vincent, Guigó, Roderic, Sammeth, Michael
Publicado 2012

TT‐seq captures enhancer landscapes immediately after T‐cell stimulation

por Michel, Margaux, Demel, Carina, Zacher, Benedikt, Schwalb, Björn, Krebs, Stefan, Blum, Helmut, Gagneur, Julien, Cramer, Patrick
Publicado 2017

Germany’s Burden of Disease of Bloodstream Infections Due to Vancomycin-Resistant Enterococcus faecium between 2015–2020

por Brinkwirth, Simon, Martins, Sofie, Ayobami, Olaniyi, Feig, Marcel, Noll, Ines, Zacher, Benedikt, Eckmanns, Tim, Werner, Guido, Willrich, Niklas, Haller, Sebastian
Publicado 2022

Healthcare-associated pneumonia in acute care hospitals in European Union/European Economic Area countries: an analysis of data from a point prevalence survey, 2011 to 2012

por Walter, Jan, Haller, Sebastian, Quinten, Chantal, Kärki, Tommi, Zacher, Benedikt, Eckmanns, Tim, Abu Sin, Muna, Plachouras, Diamantis, Kinross, Pete, Suetens, Carl
Publicado 2018

SARS-CoV-2 Omicron variants BA.1 and BA.2 both show similarly reduced disease severity of COVID-19 compared to Delta, Germany, 2021 to 2022

por Sievers, Claudia, Zacher, Benedikt, Ullrich, Alexander, Huska, Matthew, Fuchs, Stephan, Buda, Silke, Haas, Walter, Diercke, Michaela, an der Heiden, Matthias, Kröger, Stefan
Publicado 2022

Global DNA Hypomethylation Prevents Consolidation of Differentiation Programs and Allows Reversion to the Embryonic Stem Cell State

por Schmidt, Christine S., Bultmann, Sebastian, Meilinger, Daniela, Zacher, Benedikt, Tresch, Achim, Maier, Kerstin C., Peter, Christian, Martin, Dietmar E., Leonhardt, Heinrich, Spada, Fabio
Publicado 2012

Cluster analysis of resistance combinations in Escherichia coli from different human and animal populations in Germany 2014-2017

por Suwono, Beneditta, Eckmanns, Tim, Kaspar, Heike, Merle, Roswitha, Zacher, Benedikt, Kollas, Chris, Weiser, Armin A., Noll, Ines, Feig, Marcel, Tenhagen, Bernd-Alois
Publicado 2021

Geographical differences of carbapenem non-susceptible Enterobacterales and Acinetobacter spp. in Germany from 2017 to 2019

por von Laer, Anja, Eckmanns, Tim, Zacher, Benedikt, Pfennigwerth, Niels, Gatermann, Sören G., Reichert, Felix, Diercke, Michaela, Steffen, Gyde, Altmann, Doris, Reuss, Annicka
Publicado 2022

Application of a new methodology and R package reveals a high burden of healthcare-associated infections (HAI) in Germany compared to the average in the European Union/European Eco...

por Zacher, Benedikt, Haller, Sebastian, Willrich, Niklas, Walter, Jan, Abu Sin, Muna, Cassini, Alessandro, Plachouras, Diamantis, Suetens, Carl, Behnke, Michael, Gastmeier, Petra, Wieler, Lothar H., Eckmanns, Tim
Publicado 2019

Dynamic transcriptome analysis measures rates of mRNA synthesis and decay in yeast

por Miller, Christian, Schwalb, Björn, Maier, Kerstin, Schulz, Daniel, Dümcke, Sebastian, Zacher, Benedikt, Mayer, Andreas, Sydow, Jasmin, Marcinowski, Lisa, Dölken, Lars, Martin, Dietmar E, Tresch, Achim, Cramer, Patrick
Publicado 2011

Erfassung der Labortestungen auf SARS-CoV-2 in Deutschland

por Seifried, Janna, Hoffmann, Alexandra, Reda, Sarah, Böttcher, Sindy, Abu Sin, Muna, Hofmann, Alexandra, Noll, Ines, von Laer, Anja, Reuss, Annicka, Oh, Djin-Ye, Albrecht, Stefan, Stern, Daniel, Willrich, Niklas, Staat, Doreen, Zacher, Benedikt, Schneider, Marc, Feig, Marcel, Nitsche, Andreas, Rieck, Thorsten, Rexroth, Ute, Eckmanns, Tim, Hamouda, Osamah
Publicado 2021

Erratum zu: Erfassung der Labortestungen auf SARS-CoV-2 in Deutschland

por Seifried, Janna, Hoffmann, Alexandra, Reda, Sarah, Böttcher, Sindy, Abu Sin, Muna, Hofmann, Alexandra, Noll, Ines, von Laer, Anja, Reuss, Annicka, Oh, Djin-Ye, Albrecht, Stefan, Stern, Daniel, Willrich, Niklas, Staat, Doreen, Zacher, Benedikt, Schneider, Marc, Feig, Marcel, Nitsche, Andreas, Rieck, Thorsten, Rexroth, Ute, Eckmanns, Tim, Hamouda, Osamah
Publicado 2021