Identification of a pan-cancer oncogenic microRNA superfamily anchored by a central core seed motif

por Hamilton, Mark P., Rajapakshe, Kimal, Hartig, Sean M., Reva, Boris, McLellan, Michael D., Kandoth, Cyriac, Ding, Li, Zack, Travis I., Gunaratne, Preethi H., Wheeler, David A., Coarfa, Cristian, McGuire, Sean E.
Publicado 2013

ATARiS: Computational quantification of gene suppression phenotypes from multisample RNAi screens

por Shao, Diane D., Tsherniak, Aviad, Gopal, Shuba, Weir, Barbara A., Tamayo, Pablo, Stransky, Nicolas, Schumacher, Steven E., Zack, Travis I., Beroukhim, Rameen, Garraway, Levi A., Margolin, Adam A., Root, David E., Hahn, William C., Mesirov, Jill P.
Publicado 2013

Pan-cancer patterns of somatic copy-number alteration

por Zack, Travis I., Schumacher, Steven E., Carter, Scott L., Cherniack, Andrew D., Saksena, Gordon, Tabak, Barbara, Lawrence, Michael S., Zhang, Cheng-Zhong, Wala, Jeremiah, Mermel, Craig H., Sougnez, Carrie, Gabriel, Stacey B., Hernandez, Bryan, Shen, Hui, Laird, Peter W., Getz, Gad, Meyerson, Matthew, Beroukhim, Rameen
Publicado 2013

Integrated Genomic Analysis of the 8q24 Amplification in Endometrial Cancers Identifies ATAD2 as Essential to MYC-Dependent Cancers

por Raeder, Maria B., Birkeland, Even, Trovik, Jone, Krakstad, Camilla, Shehata, Shyemaa, Schumacher, Steven, Zack, Travis I., Krohn, Antje, Werner, Henrica MJ., Moody, Susan E., Wik, Elisabeth, Stefansson, Ingunn M., Holst, Frederik, Oyan, Anne M., Tamayo, Pablo, Mesirov, Jill P., Kalland, Karl H., Akslen, Lars A., Simon, Ronald, Beroukhim, Rameen, Salvesen, Helga B.
Publicado 2013

Systematic screening reveals a role for BRCA1 in the response to transcription-associated DNA damage

por Hill, Sarah J., Rolland, Thomas, Adelmant, Guillaume, Xia, Xianfang, Owen, Matthew S., Dricot, Amélie, Zack, Travis I., Sahni, Nidhi, Jacob, Yves, Hao, Tong, McKinney, Kristine M., Clark, Allison P., Reyon, Deepak, Tsai, Shengdar Q., Joung, J. Keith, Beroukhim, Rameen, Marto, Jarrod A., Vidal, Marc, Gaudet, Suzanne, Hill, David E., Livingston, David M.
Publicado 2014

The genomic landscape and evolution of endometrial carcinoma progression and abdominopelvic metastasis

por Gibson, William J., Hoivik, Erling A., Halle, Mari K., Taylor-Weiner, Amaro, Cherniack, Andrew D., Berg, Anna, Holst, Frederik, Zack, Travis I., Werner, Henrica M. J., Staby, Kjersti M., Rosenberg, Mara, Stefansson, Ingunn M., Kusonmano, Kanthida, Chevalier, Aaron, Mauland, Karen K., Trovik, Jone, Krakstad, Camilla, Giannakis, Marios, Hodis, Eran, Woie, Kathrine, Bjorge, Line, Vintermyr, Olav K., Wala, Jeremiah A., Lawrence, Michael S., Getz, Gad, Carter, Scott L., Beroukhim, Rameen, Salvesen, Helga B.
Publicado 2016

Copy-number and gene dependency analysis reveals partial copy loss of wild-type SF3B1 as a novel cancer vulnerability

por Paolella, Brenton R, Gibson, William J, Urbanski, Laura M, Alberta, John A, Zack, Travis I, Bandopadhayay, Pratiti, Nichols, Caitlin A, Agarwalla, Pankaj K, Brown, Meredith S, Lamothe, Rebecca, Yu, Yong, Choi, Peter S, Obeng, Esther A, Heckl, Dirk, Wei, Guo, Wang, Belinda, Tsherniak, Aviad, Vazquez, Francisca, Weir, Barbara A, Root, David E, Cowley, Glenn S, Buhrlage, Sara J, Stiles, Charles D, Ebert, Benjamin L, Hahn, William C, Reed, Robin, Beroukhim, Rameen
Publicado 2017

Characterizing genomic alterations in cancer by complementary functional associations

por Kim, J. W., Botvinnik, O. B., Abudayyeh, O., Birger, C., Rosenbluh, J., Shrestha, Y., Abazeed, M. E., Hammerman, P. S., DiCara, D., Konieczkowski, D. J., Johannessen, C. M., Liberzon, A., Alizad-Rahvar, A. R., Alexe, G., Aguirre, A., Ghandi, M., Greulich, H., Vazquez, F., Weir, B. A., Van Allen, E. M., Tsherniak, A., Shao, D. D., Zack, T. I., Noble, M., Getz, G., Beroukhim, R., Garraway, L. A., Ardakani, M., Romualdi, C., Sales, G., Barbie, D. A., Boehm, J. S., Hahn, W. C., Mesirov, J. P., Tamayo, P.
Publicado 2016