A Generalized Mechanistic Codon Model

por Zaheri, Maryam, Dib, Linda, Salamin, Nicolas
Publicado 2014

A novel Mixture Model Method for identification of differentially expressed genes from DNA microarray data

por Najarian, Kayvan, Zaheri, Maryam, A Rad, Ali, Najarian, Siamak, Dargahi, Javad
Publicado 2004

Does respiratory co-infection facilitate dispersal of SARS-CoV-2? investigation of a super-spreading event in an open-space office

por Weissberg, Dana, Böni, Jürg, Rampini, Silvana K., Kufner, Verena, Zaheri, Maryam, Schreiber, Peter W., Abela, Irene A., Huber, Michael, Sax, Hugo, Wolfensberger, Aline
Publicado 2020

SARS-CoV-2 variants reveal features critical for replication in primary human cells

por Pohl, Marie O., Busnadiego, Idoia, Kufner, Verena, Glas, Irina, Karakus, Umut, Schmutz, Stefan, Zaheri, Maryam, Abela, Irene, Trkola, Alexandra, Huber, Michael, Stertz, Silke, Hale, Benjamin G.
Publicado 2021

Prevalence of HIV-1 drug resistance mutations in proviral DNA in the Swiss HIV Cohort Study, a retrospective study from 1995 to 2018

por Jaha, Bashkim, Schenkel, Corinne D, Jörimann, Lisa, Huber, Michael, Zaheri, Maryam, Neumann, Kathrin, Leemann, Christine, Calmy, Alexandra, Cavassini, Matthias, Kouyos, Roger D, Günthard, Huldrych F, Metzner, Karin J
Publicado 2023

Nosocomial COVID-19 Incidence and Secondary Attack Rates among Patients of Tertiary Care Center, Zurich, Switzerland

por Wolfensberger, Aline, Kufner, Verena, Zaheri, Maryam, Zeeb, Marius, Nortes, Isabelle, Schreiber, Peter W., Vazquez, Miriam, Schärer, Verena, Scheier, Thomas, Schmutz, Stefan, Probst, Elisabeth, Saleschus, Dirk, Huber, Michael, Rampini, Silvana K., Zingg, Walter
Publicado 2022

Absence of Proviral Human Immunodeficiency Virus (HIV) Type 1 Evolution in Early-Treated Individuals With HIV Switching to Dolutegravir Monotherapy During 48 Weeks

por Jörimann, Lisa, Tschumi, Jasmin, Zeeb, Marius, Leemann, Christine, Schenkel, Corinne D, Neumann, Kathrin, Chaudron, Sandra E, Zaheri, Maryam, Frischknecht, Paul, Neuner-Jehle, Nadia, Kuster, Herbert, Braun, Dominique L, Grube, Christina, Kouyos, Roger, Metzner, Karin J, Günthard, Huldrych F
Publicado 2023

Assessing immunogenicity barriers of the HIV-1 envelope trimer

por Maliqi, Liridona, Friedrich, Nikolas, Glögl, Matthias, Schmutz, Stefan, Schmidt, Daniel, Rusert, Peter, Schanz, Merle, Zaheri, Maryam, Pasin, Chloé, Niklaus, Cyrille, Foulkes, Caio, Reinberg, Thomas, Dreier, Birgit, Abela, Irene, Peterhoff, David, Hauser, Alexandra, Kouyos, Roger D., Günthard, Huldrych F., van Gils, Marit J., Sanders, Rogier W., Wagner, Ralf, Plückthun, Andreas, Trkola, Alexandra
Publicado 2023

Antibodies from convalescent plasma promote SARS-CoV-2 clearance in individuals with and without endogenous antibody response

por Marconato, Maddalena, Abela, Irene A., Hauser, Anthony, Schwarzmüller, Magdalena, Katzensteiner, Rheliana, Braun, Dominique L., Epp, Selina, Audigé, Annette, Weber, Jacqueline, Rusert, Peter, Schindler, Eméry, Pasin, Chloé, West, Emily, Böni, Jürg, Kufner, Verena, Huber, Michael, Zaheri, Maryam, Schmutz, Stefan, Frey, Beat M., Kouyos, Roger D., Günthard, Huldrych F., Manz, Markus G., Trkola, Alexandra
Publicado 2022

Women in the European Virus Bioinformatics Center

por Hufsky, Franziska, Abecasis, Ana, Agudelo-Romero, Patricia, Bletsa, Magda, Brown, Katherine, Claus, Claudia, Deinhardt-Emmer, Stefanie, Deng, Li, Friedel, Caroline C., Gismondi, María Inés, Kostaki, Evangelia Georgia, Kühnert, Denise, Kulkarni-Kale, Urmila, Metzner, Karin J., Meyer, Irmtraud M., Miozzi, Laura, Nishimura, Luca, Paraskevopoulou, Sofia, Pérez-Cataluña, Alba, Rahlff, Janina, Thomson, Emma, Tumescheit, Charlotte, van der Hoek, Lia, Van Espen, Lore, Vandamme, Anne-Mieke, Zaheri, Maryam, Zuckerman, Neta, Marz, Manja
Publicado 2022

Swiss public health measures associated with reduced SARS-CoV-2 transmission using genome data

por Nadeau, Sarah A., Vaughan, Timothy G., Beckmann, Christiane, Topolsky, Ivan, Chen, Chaoran, Hodcroft, Emma, Schär, Tobias, Nissen, Ina, Santacroce, Natascha, Burcklen, Elodie, Ferreira, Pedro, Jablonski, Kim Philipp, Posada-Céspedes, Susana, Capece, Vincenzo, Seidel, Sophie, Santamaria de Souza, Noemi, Martinez-Gomez, Julia M., Cheng, Phil, Bosshard, Philipp P., Levesque, Mitchell P., Kufner, Verena, Schmutz, Stefan, Zaheri, Maryam, Huber, Michael, Trkola, Alexandra, Cordey, Samuel, Laubscher, Florian, Gonçalves, Ana Rita, Aeby, Sébastien, Pillonel, Trestan, Jacot, Damien, Bertelli, Claire, Greub, Gilbert, Leuzinger, Karoline, Stange, Madlen, Mari, Alfredo, Roloff, Tim, Seth-Smith, Helena, Hirsch, Hans H., Egli, Adrian, Redondo, Maurice, Kobel, Olivier, Noppen, Christoph, du Plessis, Louis, Beerenwinkel, Niko, Neher, Richard A., Beisel, Christian, Stadler, Tanja
Publicado 2022

External Quality Assessment of SARS-CoV-2 Sequencing: an ESGMD-SSM Pilot Trial across 15 European Laboratories

por Wegner, Fanny, Roloff, Tim, Huber, Michael, Cordey, Samuel, Ramette, Alban, Gerth, Yannick, Bertelli, Claire, Stange, Madlen, Seth-Smith, Helena M. B., Mari, Alfredo, Leuzinger, Karoline, Cerutti, Lorenzo, Harshman, Keith, Xenarios, Ioannis, Le Mercier, Philippe, Bittel, Pascal, Neuenschwander, Stefan, Opota, Onya, Fuchs, Jonas, Panning, Marcus, Michel, Charlotte, Hallin, Marie, Demuyser, Thomas, De Mendonca, Ricardo, Savelkoul, Paul, Dingemans, Jozef, van der Veer, Brian, Boers, Stefan A., Claas, Eric C. J., Coolen, Jordy P. M., Melchers, Willem J. G., Gunell, Marianne, Kallonen, Teemu, Vuorinen, Tytti, Hakanen, Antti J., Bernhoff, Eva, Hetland, Marit Andrea Klokkhammer, Golan Berman, Hadar, Adar, Sheera, Moran-Gilad, Jacob, Wolf, Dana G., Leib, Stephen L., Nolte, Oliver, Kaiser, Laurent, Schmutz, Stefan, Kufner, Verena, Zaheri, Maryam, Trkola, Alexandra, Aamot, Hege Vangstein, Hirsch, Hans H., Greub, Gilbert, Egli, Adrian
Publicado 2022

Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020

por Alm, Erik, Broberg, Eeva K, Connor, Thomas, Hodcroft, Emma B, Komissarov, Andrey B, Maurer-Stroh, Sebastian, Melidou, Angeliki, Neher, Richard A, O’Toole, Áine, Pereyaslov, Dmitriy, Beerenwinkel, Niko, Posada-Céspedes, Susana, Jablonski, Kim Philipp, Ferreira, Pedro Falé, Topolsky, Ivan, Avšič-Županc, Tatjana, Korva, Miša, Poljak, Mario, Zakotnik, Samo, Zorec, Tomaž Mark, Bragstad, Karoline, Hungnes, Olav, Stene-Johansen, Kathrine, Reusken, Chantal, Meijer, Adam, Vennema, Harry, Ruiz-Roldán, Lidia, Bracho, María Alma, García-González, Neris, Chiner-Oms, Álvaro, Cancino-Muñoz, Irving, Comas, Iñaki, Goig, Galo A, Torres-Puente, Manuela, López, Mariana G, Martínez-Priego, Llúcia, D'Auria, Giuseppe, Ferrús-Abad, Loreto, de Marco, Griselda, Galan-Vendrell, Inmaculada, Carbó-Ramirez, Sandra, Ruíz-Hueso, Paula, Coscollá, Mireia, Polackova, Katerina, Kramna, Lenka, Cinek, Ondrej, Richter, Jan, Krashias, George, Tryfonos, Christina, Bashiardes, Stavros, Koptides, Dana, Christodoulou, Christina, Bartolini, Barbara, Gruber, Cesare Em, Di Caro, Antonino, Castilletti, Concetta, Stefani, Fabrizio, Rimoldi, Sara Giordana, Romeri, Francesca, Salerno, Franco, Polesello, Stefano, Nagy, Alexander, Jirincova, Helena, Vecerova, Jaromira, Novakova, Ludmila, Cordey, Samuel, Murtskhvaladze, Marine, Kotaria, Nato, Schär, Tobias, Beisel, Christian, Vugrek, Oliver, Rokić, Filip, Trgovec-Greif, Lovro, Jurak, Igor, Rukavina, Tomislav, Sučić, Neven, Schønning, Kristian, Karst, Søren M, Kirkegaard, Rasmus H, Michaelsen, Thomas Y, Sørensen, Emil Aa, Knutson, Simon, Brandt, Jakob, Le-Quy, Vang, Sørensen, Trine, Petersen, Celine, Pedersen, Martin Schou, Larsen, Sanne Løkkegaard, Skov, Marianne Nielsine, Rasmussen, Morten, Fonager, Jannik, Fomsgaard, Anders, Maksyutov, Rinat Amirovich, Gavrilova, Elena Vasil'Evna, Pyankov, Oleg Victorovich, Bodnev, Sergey Alexandrovich, Tregubchak, Tatyana Vladimirovna, Shvalov, Alexander Nikolayevich, Antonets, Denis Victorovich, Resende, Paola Cristina, Goya, Stephanie, Perrin, Amandine, Lee, Raphael Tc, Yadahalli, Shilpa, Han, Alvin X, Russell, Colin A, Schmutz, Stefan, Zaheri, Maryam, Kufner, Verena, Huber, Michael, Trkola, Alexandra, Antwerpen, Markus, Walter, Mathias C, van der Werf, Sylvie, Gambaro, Fabiana, Behillil, Sylvie, Enouf, Vincent, Donati, Flora, Ustinova, Monta, Rovite, Vita, Klovins, Janis, Savicka, Oksana, Wienecke-Baldacchino, Anke K, Ragimbeau, Catherine, Fournier, Guillaume, Mossong, Joël, Aberle, Stephan W, Haukland, Mattias, Enkirch, Theresa, Advani, Abdolreza, Karlberg, Maria Lind, Lindsjö, Oskar Karlsson, Broddesson, Sandra, Sláviková, Monika, Ličková, Martina, Klempa, Boris, Staroňová, Edita, Tichá, Elena, Szemes, Tomáš, Rusňáková, Diana, Stadler, Tanja, Quer, Josep, Anton, Andres, Andres, Cristina, Piñana, Maria, Garcia-Cehic, Damir, Pumarola, Tomas, Izopet, Jacques, Gioula, Georgia, Exindari, Maria, Papa, Anna, Chatzidimitriou, Dimitrios, Metallidis, Symeon, Pappa, Stella, Macek Jr, Milan, Geryk, Jan, Brož, Petr, Briksí, Aleš, Hubáček, Petr, Dřevínek, Pavel, Zajac, Miroslav, Kvapil, Petr, Holub, Michal, Kvapilová, Kateřina, Novotný, Adam, Kašný, Martin, Klempt, Petr, Vapalahti, Olli, Smura, Teemu, Sironen, Tarja, Selhorst, Philippe, Anthony, Colin, Ariën, Kevin, Simon-Loriere, Etienne, Rabalski, Lukasz, Bienkowska-Szewczyk, Krystyna, Borges, Vítor, Isidro, Joana, Gomes, João Paulo, Guiomar, Raquel, Pechirra, Pedro, Costa, Inês, Duarte, Sílvia, Vieira, Luís, Pyrc, Krzysztof, Zuckerman, Neta S, Turdikulova, Shahlo, Abdullaev, Alisher, Dalimova, Dilbar, Abdurakhimov, Abror, Tagliabracci, Adriano, Alessandrini, Federica, Melchionda, Filomena, Onofri, Valerio, Turchi, Chiara, Bagnarelli, Patrizia, Menzo, Stefano, Caucci, Sara, Di Sante, Laura, Popa, Alexandra, Genger, Jakob-Wendelin, Agerer, Benedikt, Lercher, Alexander, Endler, Lukas, Smyth, Mark, Penz, Thomas, Schuster, Michael, Senekowitsch, Martin, Laine, Jan, Bock, Christoph, Bergthaler, Andreas, Shevtsov, Alexandr, Kalendar, Ruslan, Ramanculov, Yerlan, Graf, Alexander, Muenchhoff, Maximilian, Keppler, Oliver T, Krebs, Stefan, Blum, Helmut, Marcello, Alessandro, Licastro, Danilo, D'Agaro, Pierlanfranco, Laubscher, Florian, Vidanovic, Dejan, Tesovic, Bojana, Volkening, Jeremy, Clementi, Nicola, Mancini, Nicasio, Rupnik, Maja, Mahnic, Aleksander, Walker, Andreas, Houwaart, Torsten, Wienemann, Tobias, Vasconcelos, Malte Kohns, Strelow, Daniel, Jensen, Björn-Erik Ole, Senff, Tina, Hülse, Lisanna, Adams, Ortwin, Andree, Marcel, Hauka, Sandra, Feldt, Torsten, Keitel, Verena, Kindgen-Milles, Detlef, Timm, Jörg, Pfeffer, Klaus, Dilthey, Alexander T, Moore, Catherine, Ozdarendeli, Aykut, Pavel, Shaikh Terkis Islam, Yetiskin, Hazel, Aydin, Gunsu, Holyavkin, Can, Uygut, Muhammet Ali, Cevik, Ceren, Shchetinin, Alexey, Gushchin, Vladimir, Dinler-Doganay, Gizem, Doganay, Levent, Kizilboga-Akgun, Tugba, Karacan, Ilker, Pancer, Katarzyna, Maes, Piet, Martí-Carreras, Joan, Wawina-Bokalanga, Tony, Vanmechelen, Bert, Thürmer, Andrea, Wedde, Marianne, Dürrwald, Ralf, Von Kleist, Max, Drechsel, Oliver, Wolff, Thorsten, Fuchs, Stephan, Kmiecinski, Rene, Michel, Janine, Nitsche, Andreas, Casas, Inmaculada, Caballero, María Iglesias, Zaballos, Ángel, Jiménez, Pilar, Jiménez, Mercedes, Fernández, Sara Monzón, Fernández, Sarai Varona, De La Plaza, Isabel Cuesta, Fadeev, Artem, Ivanova, Anna, Sergeeva, Mariia, Stefanelli, Paola, Torok, M Estee, Hall, Grant, da Silva Filipe, Ana, Turtle, Lance, Afifi, Safiah, Mccluggage, Kathryn, Beer, Robert, Ledesma, Juan, Maksimovic, Joshua, Spellman, Karla, Hamilton, William L, Marchbank, Angela, Southgate, Joel Alexander, Underwood, Anthony, Taylor, Ben, Yeats, Corin, Abudahab, Khalil, Gemmell, Matthew R, Eccles, Richard, Lucaci, Anita, Nelson, Charlotte Abigail, Rainbow, Lucille, Whitehead, Mark, Gregory, Richard, Haldenby, Sam, Paterson, Steve, Hughes, Margaret A, Curran, Martin D, Baker, David, Tucker, Rachel, Green, Luke R, Feltwell, Theresa, Halstead, Fenella D, Wyles, Matthew, Jahun, Aminu S, Ahmad, Shazaad S Y, Georgana, Iliana, Goodfellow, Ian, Yakovleva, Anna, Meredith, Luke W, Gavriil, Artemis, Awan, Ali Raza, Fisher, Chloe, Edgeworth, Jonathan, Lynch, Jessica, Moore, Nathan, Williams, Rebecca, Kidd, Stephen P, Cortes, Nicholas, Brunker, Kirstyn, Mccrone, John T, Quick, Joshua, Duckworth, Nichola, Walsh, Sarah, Sloan, Tim, Ludden, Catherine, George, Ryan P, Eltringham, Gary, Brown, Julianne R, Aranday-Cortes, Elihu, Shepherd, James G, Hughes, Joseph, Li, Kathy K, Williams, Thomas C, Johnson, Natasha, Jesudason, Natasha, Mair, Daniel, Thomson, Emma, Shah, Rajiv, Parr, Yasmin A, Carmichael, Stephen, Robertson, David L, Nomikou, Kyriaki, Broos, Alice, Niebel, Marc, Smollett, Katherine, Tong, Lily, Miah, Shahjahan, Wittner, Anita, Phillips, Nicole, Payne, Brendan, Dewar, Rebecca, Holmes, Alison, Bolt, Frances, Price, James R, Mookerjee, Siddharth, Sethi, Dheeraj K, Potter, Will, Stanley, Rachael, Prakash, Reenesh, Dervisevic, Samir, Graham, Jonathan Clive, Nelson, Andrew, Smith, Darren, Young, Gregory R, Yew, Wen Chyin, Todd, John A, Trebes, Amy, Andersson, Monique, Bull, Matthew, Watkins, Joanne, Birchley, Alec, Gatica-Wilcox, Bree, Gilbert, Lauren, Kumžiene-Summerhayes, Sara, Rey, Sara, Chauhan, Anoop, Butcher, Ethan, Bicknell, Kelly, Elliott, Scott, Glaysher, Sharon, Lackenby, Angie, Bibby, David, Platt, Steven, Mohamed, Hodan, Machin, Nicholas William, Mbisa, Jean Lutamyo, Evans, Jonathan, Perry, Malorie, Pacchiarini, Nicole, Corden, Sally, Adams, Alexander Geraint, Gaskin, Amy, Coombs, Jason, Graham, Lee John, Cottrell, Simon, Morgan, Mari, Gifford, Laura, Kolyva, Anastasia, Rudder, Steven John, Trotter, Alexander J, Mather, Alison E, Aydin, Alp, Page, Andrew J, Kay, Gemma L, de Oliveira Martins, Leonardo, Yasir, Muhammad, Alikhan, Nabil-Fareed, Thomson, Nicholas M, Gilroy, Rachel, Kingsley, Robert A, O'Grady, Justin, Gutierrez, Ana Victoria, Diaz, Maria, Le Viet, Thanh, Tedim, Ana P, Adriaenssens, Evelien M, Mcclure, C Patrick, Moore, Christopher, Sang, Fei, Clark, Gemma, Howson-Wells, Hannah C, Debebe, Johnny, Ball, Jonathan, Chappell, Joseph, Khakh, Manjinder, Carlile, Matthew, Loose, Matthew, Lister, Michelle M, Holmes, Nadine, Tsoleridis, Theocharis, Fleming, Vicki M, Wright, Victoria, Smith, Wendy, Gallagher, Michael D, Parker, Matthew, Partridge, David G, Evans, Cariad, Baker, Paul, Essex, Sarah, Liggett, Steven, Keeley, Alexander J, Bashton, Matthew, Rooke, Stefan, Dervisevic, Samir, Meader, Emma Jane, Balcazar Lopez, Carlos Enrique, Angyal, Adrienn, Kristiansen, Mark, Tutill, Helena J, Findlay, Jacqueline, Mestek-Boukhibar, Lamia, Forrest, Leysa, Dyal, Patricia, Williams, Rachel J, Panchbhaya, Yasmin, Williams, Charlotte A, Roy, Sunando, Pandey, Sarojini, Stockton, Jo, Loman, Nicholas J, Poplawski, Radoslaw, Nicholls, Samuel, Rowe, W P M, Khokhar, Fahad, Pinckert, Malte Lars, Hosmillo, Myra, Chaudhry, Yasmin, Caller, Laura G, Davidson, Rose K, Griffith, Luke, Rambaut, Andrew, Jackson, Ben, Colquhoun, Rachel, Hill, Verity, Nichols, Jenna, Asamaphan, Patawee, Darby, Alistair, Jackson, Kathryn A, Iturriza-Gomara, Miren, Vamos, Ecaterina Edith, Green, Angie, Aanensen, David, Bonsall, David, Buck, David, Macintyre-Cockett, George, de Cesare, Mariateresa, Pybus, Oliver, Golubchik, Tanya, Scarlett, Garry, Loveson, Katie F, Robson, Samuel C, Beckett, Angela, Lindsey, Benjamin, Groves, Danielle C, Parsons, Paul J, Mchugh, Martin P, Barnes, James Daniel, Manso, Carmen F, Grammatopoulos, Dimitris, Menger, Katja Elisabeth, Harrison, Ewan, Gunson, Rory, Peacock, Sharon J, Gonzalez, Gabriel, Carr, Michael, Mihaela, Lazar, Popovici, Odette, Brytting, Mia, Bresner, Catherine, Fuller, William, Workman, Trudy, Mentis, Andreas F, Kossyvakis, Athanasios, Karamitros, Timokratis, Pogka, Vasiliki, Kalliaropoulos, Antonios, Horefti, Elina, Kontou, Aspasia, Martinez-Gonzalez, Beatriz, Labropoulou, Voula, Voulgari-Kokota, Androniki, Evangelidou, Maria, Bizta, Panagiota, Belimezi, Maria, Lambrechts, Laurens, Doymaz, Mehmet Z, Yazici, Merve Kalkan, Cetin, Nesibe S, Karaaslan, Elif, Kallio-Kokko, Hannimari, Virtanen, Jenni, Suvanto, Maija, Nguyen, Phuoc Truong, Ellonen, Pekka, Hannula, Sari, Kangas, Harri, Sreenu, Vattipally B, Burián, Katalin, Terhes, Gabriella, Gombos, Katalin, Gyenesei, Attila, Urbán, Péter, Herczeg, Róbert, Jakab, Ferenc, Kemenesi, Gábor, Tóth, Gábor Endre, Somogyi, Balázs, Zana, Brigitta, Zeghbib, Safia, Kuczmog, Anett, Földes, Fanni, Lanszki, Zsófia, Madai, Mónika, Papp, Henrietta, Nagy, Ágnes, Pereszlényi, Csaba István, Babinszky, Gergely Csaba, Dudás, Gábor, Csoma, Eszter, Abou Tayoun, Ahmad N, Alsheikh-Ali, Alawi A, Loney, Tom, Nowotny, Norbert, Abdul-Wahab, Osama, Gonzalez-Candelas, Fernando, Andersen, Martin H, Taylor, Sarah
Publicado 2020