Protein Engineering in the Design of Protein–Protein Interactions: SARS-CoV-2 Inhibitors as a Test Case

por Zahradník, Jiří, Schreiber, Gideon
Publicado 2021

Draft Genome Sequence of Agrobacterium sp. Strain R89-1, a Morphine Alkaloid-Biotransforming Bacterium

por Zahradník, Jiří, Kyslíková, Eva, Kyslík, Pavel
Publicado 2016

Perspectives: SARS-CoV-2 Spike Convergent Evolution as a Guide to Explore Adaptive Advantage

por Zahradník, Jiri, Nunvar, Jaroslav, Schreiber, Gideon
Publicado 2022

Geodynamic subduction models constrained by deep earthquakes beneath the Japan Sea and eastern China

por Čížková, Hana, Zahradník, Jiří, Liu, Junqing, Bina, Craig R.
Publicado 2020

Regulation of IL-24/IL-20R2 complex formation using photocaged tyrosines and UV light

por Pham, Phuong Ngoc, Zahradník, Jiří, Kolářová, Lucie, Schneider, Bohdan, Fuertes, Gustavo
Publicado 2023

Draft Genome Sequence of Pantoea agglomerans JM1, a Strain Isolated from Soil Polluted by Industrial Production of Beta-Lactam Antibiotics That Exhibits Valacyclovir-Like Hydrolase...

por Zahradník, Jiří, Plačková, Martina, Palyzová, Andrea, Marešová, Helena, Kyslíková, Eva, Kyslík, Pavel
Publicado 2017

Redesigning Protein Cavities as a Strategy for Increasing Affinity in Protein-Protein Interaction: Interferon-γ Receptor 1 as a Model

por Černý, Jiří, Biedermannová, Lada, Mikulecký, Pavel, Zahradník, Jiří, Charnavets, Tatsiana, Šebo, Peter, Schneider, Bohdan
Publicado 2015

Enhanced transmissibility, infectivity, and immune resistance of the SARS-CoV-2 omicron XBB.1.5 variant

por Uriu, Keiya, Ito, Jumpei, Zahradnik, Jiri, Fujita, Shigeru, Kosugi, Yusuke, Schreiber, Gideon, Sato, Kei
Publicado 2023

A Protein-Engineered, Enhanced Yeast Display Platform for Rapid Evolution of Challenging Targets

por Zahradník, Jiří, Dey, Debabrata, Marciano, Shir, Kolářová, Lucie, Charendoff, Chloé I., Subtil, Agathe, Schreiber, Gideon
Publicado 2021

Virological characteristics of the SARS-CoV-2 omicron XBB.1.16 variant

por Yamasoba, Daichi, Uriu, Keiya, Plianchaisuk, Arnon, Kosugi, Yusuke, Pan, Lin, Zahradnik, Jiri, Ito, Jumpei, Sato, Kei
Publicado 2023

Crystal structure of human interferon-γ receptor 2 reveals the structural basis for receptor specificity

por Mikulecký, Pavel, Zahradník, Jirí, Kolenko, Petr, Černý, Jiří, Charnavets, Tatsiana, Kolářová, Lucie, Nečasová, Iva, Pham, Phuong Ngoc, Schneider, Bohdan
Publicado 2016

The crystal structure of XdpB, the bacterial old yellow enzyme, in an FMN-free form

por Zahradník, Jiří, Kolenko, Petr, Palyzová, Andrea, Černý, Jiří, Kolářová, Lucie, Kyslíková, Eva, Marešová, Helena, Grulich, Michal, Nunvar, Jaroslav, Šulc, Miroslav, Kyslík, Pavel, Schneider, Bohdan
Publicado 2018

Genetically Engineered MRI-Trackable Extracellular Vesicles as SARS-CoV-2 Mimetics for Mapping ACE2 Binding In Vivo

por Galisova, Andrea, Zahradnik, Jiri, Allouche-Arnon, Hyla, Morandi, Mattia I., Abou Karam, Paula, Fisler, Michal, Avinoam, Ori, Regev-Rudzki, Neta, Schreiber, Gideon, Bar-Shir, Amnon
Publicado 2022

Protein Binder (ProBi) as a New Class of Structurally Robust Non-Antibody Protein Scaffold for Directed Evolution

por Pham, Phuong Ngoc, Huličiak, Maroš, Biedermannová, Lada, Černý, Jiří, Charnavets, Tatsiana, Fuertes, Gustavo, Herynek, Štěpán, Kolářová, Lucie, Kolenko, Petr, Pavlíček, Jiří, Zahradník, Jiří, Mikulecky, Pavel, Schneider, Bohdan
Publicado 2021

The SARS-CoV-2 Lambda variant exhibits enhanced infectivity and immune resistance

por Kimura, Izumi, Kosugi, Yusuke, Wu, Jiaqi, Zahradnik, Jiri, Yamasoba, Daichi, Butlertanaka, Erika P., Tanaka, Yuri L., Uriu, Keiya, Liu, Yafei, Morizako, Nanami, Shirakawa, Kotaro, Kazuma, Yasuhiro, Nomura, Ryosuke, Horisawa, Yoshihito, Tokunaga, Kenzo, Ueno, Takamasa, Takaori-Kondo, Akifumi, Schreiber, Gideon, Arase, Hisashi, Motozono, Chihiro, Saito, Akatsuki, Nakagawa, So, Sato, Kei
Publicado 2022

SARS-CoV-2 spike L452R variant evades cellular immunity and increases infectivity

por Motozono, Chihiro, Toyoda, Mako, Zahradnik, Jiri, Saito, Akatsuki, Nasser, Hesham, Tan, Toong Seng, Ngare, Isaac, Kimura, Izumi, Uriu, Keiya, Kosugi, Yusuke, Yue, Yuan, Shimizu, Ryo, Ito, Jumpei, Torii, Shiho, Yonekawa, Akiko, Shimono, Nobuyuki, Nagasaki, Yoji, Minami, Rumi, Toya, Takashi, Sekiya, Noritaka, Fukuhara, Takasuke, Matsuura, Yoshiharu, Schreiber, Gideon, Ikeda, Terumasa, Nakagawa, So, Ueno, Takamasa, Sato, Kei
Publicado 2021

The SARS-CoV-2 spike S375F mutation characterizes the Omicron BA.1 variant

por Kimura, Izumi, Yamasoba, Daichi, Nasser, Hesham, Zahradnik, Jiri, Kosugi, Yusuke, Wu, Jiaqi, Nagata, Kayoko, Uriu, Keiya, Tanaka, Yuri L., Ito, Jumpei, Shimizu, Ryo, Tan, Toong Seng, Butlertanaka, Erika P., Asakura, Hiroyuki, Sadamasu, Kenji, Yoshimura, Kazuhisa, Ueno, Takamasa, Takaori-Kondo, Akifumi, Schreiber, Gideon, Toyoda, Mako, Shirakawa, Kotaro, Irie, Takashi, Saito, Akatsuki, Nakagawa, So, Ikeda, Terumasa, Sato, Kei
Publicado 2022

Convergent evolution of SARS-CoV-2 Omicron subvariants leading to the emergence of BQ.1.1 variant

por Ito, Jumpei, Suzuki, Rigel, Uriu, Keiya, Itakura, Yukari, Zahradnik, Jiri, Kimura, Kanako Terakado, Deguchi, Sayaka, Wang, Lei, Lytras, Spyros, Tamura, Tomokazu, Kida, Izumi, Nasser, Hesham, Shofa, Maya, Begum, Mst Monira, Tsuda, Masumi, Oda, Yoshitaka, Suzuki, Tateki, Sasaki, Jiei, Sasaki-Tabata, Kaori, Fujita, Shigeru, Yoshimatsu, Kumiko, Ito, Hayato, Nao, Naganori, Asakura, Hiroyuki, Nagashima, Mami, Sadamasu, Kenji, Yoshimura, Kazuhisa, Yamamoto, Yuki, Nagamoto, Tetsuharu, Kuramochi, Jin, Schreiber, Gideon, Saito, Akatsuki, Matsuno, Keita, Takayama, Kazuo, Hashiguchi, Takao, Tanaka, Shinya, Fukuhara, Takasuke, Ikeda, Terumasa, Sato, Kei
Publicado 2023

Virological characteristics of the SARS-CoV-2 XBB variant derived from recombination of two Omicron subvariants

por Tamura, Tomokazu, Ito, Jumpei, Uriu, Keiya, Zahradnik, Jiri, Kida, Izumi, Anraku, Yuki, Nasser, Hesham, Shofa, Maya, Oda, Yoshitaka, Lytras, Spyros, Nao, Naganori, Itakura, Yukari, Deguchi, Sayaka, Suzuki, Rigel, Wang, Lei, Begum, MST Monira, Kita, Shunsuke, Yajima, Hisano, Sasaki, Jiei, Sasaki-Tabata, Kaori, Shimizu, Ryo, Tsuda, Masumi, Kosugi, Yusuke, Fujita, Shigeru, Pan, Lin, Sauter, Daniel, Yoshimatsu, Kumiko, Suzuki, Saori, Asakura, Hiroyuki, Nagashima, Mami, Sadamasu, Kenji, Yoshimura, Kazuhisa, Yamamoto, Yuki, Nagamoto, Tetsuharu, Schreiber, Gideon, Maenaka, Katsumi, Hashiguchi, Takao, Ikeda, Terumasa, Fukuhara, Takasuke, Saito, Akatsuki, Tanaka, Shinya, Matsuno, Keita, Takayama, Kazuo, Sato, Kei
Publicado 2023

Virological characteristics of the SARS-CoV-2 Omicron BA.2 subvariants, including BA.4 and BA.5

por Kimura, Izumi, Yamasoba, Daichi, Tamura, Tomokazu, Nao, Naganori, Suzuki, Tateki, Oda, Yoshitaka, Mitoma, Shuya, Ito, Jumpei, Nasser, Hesham, Zahradnik, Jiri, Uriu, Keiya, Fujita, Shigeru, Kosugi, Yusuke, Wang, Lei, Tsuda, Masumi, Kishimoto, Mai, Ito, Hayato, Suzuki, Rigel, Shimizu, Ryo, Begum, MST Monira, Yoshimatsu, Kumiko, Kimura, Kanako Terakado, Sasaki, Jiei, Sasaki-Tabata, Kaori, Yamamoto, Yuki, Nagamoto, Tetsuharu, Kanamune, Jun, Kobiyama, Kouji, Asakura, Hiroyuki, Nagashima, Mami, Sadamasu, Kenji, Yoshimura, Kazuhisa, Shirakawa, Kotaro, Takaori-Kondo, Akifumi, Kuramochi, Jin, Schreiber, Gideon, Ishii, Ken J., Hashiguchi, Takao, Ikeda, Terumasa, Saito, Akatsuki, Fukuhara, Takasuke, Tanaka, Shinya, Matsuno, Keita, Sato, Kei
Publicado 2022