Draft Genome Assemblies of Ionic Liquid-Resistant Yarrowia lipolytica PO1f and Its Superior Evolved Strain, YlCW001

por Walker, Caleb, Ryu, Seunghyun, Haridas, Sajeet, Na, Hyunsoo, Zane, Matthew, LaButti, Kurt, Barry, Kerrie, Grigoriev, Igor V., Trinh, Cong T.
Publicado 2020

Genomic prediction of switchgrass winter survivorship across diverse lowland populations

por Tilhou, Neal W, Poudel, Hari P, Lovell, John, Mamidi, Sujan, Schmutz, Jeremy, Daum, Christopher, Zane, Matthew, Yoshinaga, Yuko, Lipzen, Anna, Casler, Michael D
Publicado 2023

Draft Genome Sequence of a Rare Smut Relative, Tilletiaria anomala UBC 951

por Toome, Merje, Kuo, Alan, Henrissat, Bernard, Lipzen, Anna, Tritt, Andrew, Yoshinaga, Yuko, Zane, Matthew, Barry, Kerrie, Grigoriev, Igor V., Spatafora, Joseph W., Aime, M. Catherine
Publicado 2014

Draft Genome Assemblies of Five Robust Yarrowia lipolytica Strains Exhibiting High Lipid Production, Pentose Sugar Utilization, and Sugar Alcohol Secretion from Undetoxified Lignoc...

por Walker, Caleb, Ryu, Seunghyun, Na, Hyunsoo, Zane, Matthew, LaButti, Kurt, Lipzen, Anna, Haridas, Sajeet, Barry, Kerrie, Grigoriev, Igor V., Quarterman, Joshua, Slininger, Patricia, Dien, Bruce, Trinh, Cong T.
Publicado 2018

High-resolution mapping reveals hotspots and sex-biased recombination in Populus trichocarpa

por Abeyratne, Chanaka Roshan, Macaya-Sanz, David, Zhou, Ran, Barry, Kerrie W, Daum, Christopher, Haiby, Kathy, Lipzen, Anna, Stanton, Brian, Yoshinaga, Yuko, Zane, Matthew, Tuskan, Gerald A, DiFazio, Stephen P
Publicado 2022

Genome Analysis of Planctomycetes Inhabiting Blades of the Red Alga Porphyra umbilicalis

por Kim, Jay W., Brawley, Susan H., Prochnik, Simon, Chovatia, Mansi, Grimwood, Jane, Jenkins, Jerry, LaButti, Kurt, Mavromatis, Konstantinos, Nolan, Matt, Zane, Matthew, Schmutz, Jeremy, Stiller, John W., Grossman, Arthur R.
Publicado 2016

Next generation sequencing data of a defined microbial mock community

por Singer, Esther, Andreopoulos, Bill, Bowers, Robert M., Lee, Janey, Deshpande, Shweta, Chiniquy, Jennifer, Ciobanu, Doina, Klenk, Hans-Peter, Zane, Matthew, Daum, Christopher, Clum, Alicia, Cheng, Jan-Fang, Copeland, Alex, Woyke, Tanja
Publicado 2016

Genome Sequences of Industrially Relevant Saccharomyces cerevisiae Strain M3707, Isolated from a Sample of Distillers Yeast and Four Haploid Derivatives

por Brown, Steven D., Klingeman, Dawn M., Johnson, Courtney M., Clum, Alicia, Aerts, Andrea, Salamov, Asaf, Sharma, Aditi, Zane, Matthew, Barry, Kerrie, Grigoriev, Igor V., Davison, Brian H., Lynd, Lee R., Gilna, Paul, Hau, Heidi, Hogsett, David A., Froehlich, Allan C.
Publicado 2013

Shotgun metagenome data of a defined mock community using Oxford Nanopore, PacBio and Illumina technologies

por Sevim, Volkan, Lee, Juna, Egan, Robert, Clum, Alicia, Hundley, Hope, Lee, Janey, Everroad, R. Craig, Detweiler, Angela M., Bebout, Brad M., Pett-Ridge, Jennifer, Göker, Markus, Murray, Alison E., Lindemann, Stephen R., Klenk, Hans-Peter, O’Malley, Ronan, Zane, Matthew, Cheng, Jan-Fang, Copeland, Alex, Daum, Christopher, Singer, Esther, Woyke, Tanja
Publicado 2019

JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom

por Sreedasyam, Avinash, Plott, Christopher, Hossain, Md Shakhawat, Lovell, John T, Grimwood, Jane, Jenkins, Jerry W, Daum, Christopher, Barry, Kerrie, Carlson, Joseph, Shu, Shengqiang, Phillips, Jeremy, Amirebrahimi, Mojgan, Zane, Matthew, Wang, Mei, Goodstein, David, Haas, Fabian B, Hiss, Manuel, Perroud, Pierre-François, Jawdy, Sara S, Yang, Yongil, Hu, Rongbin, Johnson, Jenifer, Kropat, Janette, Gallaher, Sean D, Lipzen, Anna, Shakirov, Eugene V, Weng, Xiaoyu, Torres-Jerez, Ivone, Weers, Brock, Conde, Daniel, Pappas, Marilia R, Liu, Lifeng, Muchlinski, Andrew, Jiang, Hui, Shyu, Christine, Huang, Pu, Sebastian, Jose, Laiben, Carol, Medlin, Alyssa, Carey, Sankalpi, Carrell, Alyssa A, Chen, Jin-Gui, Perales, Mariano, Swaminathan, Kankshita, Allona, Isabel, Grattapaglia, Dario, Cooper, Elizabeth A, Tholl, Dorothea, Vogel, John P, Weston, David J, Yang, Xiaohan, Brutnell, Thomas P, Kellogg, Elizabeth A, Baxter, Ivan, Udvardi, Michael, Tang, Yuhong, Mockler, Todd C, Juenger, Thomas E, Mullet, John, Rensing, Stefan A, Tuskan, Gerald A, Merchant, Sabeeha S, Stacey, Gary, Schmutz, Jeremy
Publicado 2023

Genomic mechanisms of climate adaptation in polyploid bioenergy switchgrass

por Lovell, John T., MacQueen, Alice H., Mamidi, Sujan, Bonnette, Jason, Jenkins, Jerry, Napier, Joseph D., Sreedasyam, Avinash, Healey, Adam, Session, Adam, Shu, Shengqiang, Barry, Kerrie, Bonos, Stacy, Boston, LoriBeth, Daum, Christopher, Deshpande, Shweta, Ewing, Aren, Grabowski, Paul P., Haque, Taslima, Harrison, Melanie, Jiang, Jiming, Kudrna, Dave, Lipzen, Anna, Pendergast, Thomas H., Plott, Chris, Qi, Peng, Saski, Christopher A., Shakirov, Eugene V., Sims, David, Sharma, Manoj, Sharma, Rita, Stewart, Ada, Singan, Vasanth R., Tang, Yuhong, Thibivillier, Sandra, Webber, Jenell, Weng, Xiaoyu, Williams, Melissa, Wu, Guohong Albert, Yoshinaga, Yuko, Zane, Matthew, Zhang, Li, Zhang, Jiyi, Behrman, Kathrine D., Boe, Arvid R., Fay, Philip A., Fritschi, Felix B., Jastrow, Julie D., Lloyd-Reilley, John, Martínez-Reyna, Juan Manuel, Matamala, Roser, Mitchell, Robert B., Rouquette, Francis M., Ronald, Pamela, Saha, Malay, Tobias, Christian M., Udvardi, Michael, Wing, Rod A., Wu, Yanqi, Bartley, Laura E., Casler, Michael, Devos, Katrien M., Lowry, David B., Rokhsar, Daniel S., Grimwood, Jane, Juenger, Thomas E., Schmutz, Jeremy
Publicado 2021