FFPopSim: an efficient forward simulation package for the evolution of large populations

por Zanini, Fabio, Neher, Richard A.
Publicado 2012

In vivo mutation rates and the landscape of fitness costs of HIV-1

por Zanini, Fabio, Puller, Vadim, Brodin, Johanna, Albert, Jan, Neher, Richard A.
Publicado 2017

Cholesteatoma of external auditory canal: a case report

por Zanini, Fábio D., Ameno, Everton S., Magaldi, Sidney O., Lamar, Ruben A.
Publicado 2015

Single-cell transcriptional dynamics of flavivirus infection

por Zanini, Fabio, Pu, Szu-Yuan, Bekerman, Elena, Einav, Shirit, Quake, Stephen R
Publicado 2018

Analysing high-throughput sequencing data in Python with HTSeq 2.0

por Putri, Givanna H, Anders, Simon, Pyl, Paul Theodor, Pimanda, John E, Zanini, Fabio
Publicado 2022

Population genomics of intrapatient HIV-1 evolution

por Zanini, Fabio, Brodin, Johanna, Thebo, Lina, Lanz, Christa, Bratt, Göran, Albert, Jan, Neher, Richard A
Publicado 2015

Establishment and stability of the latent HIV-1 DNA reservoir

por Brodin, Johanna, Zanini, Fabio, Thebo, Lina, Lanz, Christa, Bratt, Göran, Neher, Richard A, Albert, Jan
Publicado 2016

Disentangling single-cell omics representation with a power spectral density-based feature extraction

por Zandavi, Seid Miad, Koch, Forrest C, Vijayan, Abhishek, Zanini, Fabio, Mora, Fatima Valdes, Ortega, David Gallego, Vafaee, Fatemeh
Publicado 2022

Incidence, triggering factors, symptoms, and treatment of anaphylaxis in a pediatric hospital()

por Nunes, Fabiana A., Zanini, Fábio, Braga, Camilla de S., da Silva, Andreza L., Fernandes, Fátima R., Solé, Dirceu, Wandalsen, Gustavo F.
Publicado 2022

Influence of Hospitalization upon Diagnosis on the Risk of Tuberculosis Clustering

por Lapadula, Giuseppe, Zanini, Fabio, Codecasa, Luigi, Franzetti, Fabio, Ferrarese, Maurizio, Carugati, Manuela, Mazzola, Ester, Schiroli, Consuelo, Motta, Davide, Iemmi, Diego, Gori, Andrea
Publicado 2013

The transcriptional landscape of Venezuelan equine encephalitis virus (TC-83) infection

por Yao, Zhiyuan, Zanini, Fabio, Kumar, Sathish, Karim, Marwah, Saul, Sirle, Bhalla, Nishank, Panpradist, Nuttada, Muniz, Avery, Narayanan, Aarthi, Quake, Stephen R., Einav, Shirit
Publicado 2021

Diverse homeostatic and immunomodulatory roles of immune cells in the developing mouse lung at single cell resolution

por Domingo-Gonzalez, Racquel, Zanini, Fabio, Che, Xibing, Liu, Min, Jones, Robert C, Swift, Michael A, Quake, Stephen R, Cornfield, David N, Alvira, Cristina M
Publicado 2020

Northstar enables automatic classification of known and novel cell types from tumor samples

por Zanini, Fabio, Berghuis, Bojk A., Jones, Robert C., Nicolis di Robilant, Benedetta, Nong, Rachel Yuan, Norton, Jeffrey A., Clarke, Michael F., Quake, Stephen R.
Publicado 2020

CD4+ T Cell Depletion, Immune Activation and Increased Production of Regulatory T Cells in the Thymus of HIV-Infected Individuals

por Bandera, Alessandra, Ferrario, Giulio, Saresella, Marina, Marventano, Ivana, Soria, Alessandro, Zanini, Fabio, Sabbatini, Francesca, Airoldi, Monica, Marchetti, Giulia, Franzetti, Fabio, Trabattoni, Daria, Clerici, Mario, Gori, Andrea
Publicado 2010

An Agonistic Anti-CD137 Antibody Disrupts Lymphoid Follicle Structure and T-Cell-Dependent Antibody Responses

por Hong, Jun P., Reynoso, Glennys V., Andhey, Prabhakar S., Swain, Amanda, Turner, Jackson S., Boon, Adrianus C.M., Krammer, Florian, Ellebedy, Ali H., Zanini, Fabio, Artyomov, Maxim, Hickman, Heather D., Diamond, Michael S.
Publicado 2020

Developmental diversity and unique sensitivity to injury of lung endothelial subtypes during postnatal growth

por Zanini, Fabio, Che, Xibing, Knutsen, Carsten, Liu, Min, Suresh, Nina E., Domingo-Gonzalez, Racquel, Dou, Steve H., Zhang, Daoqin, Pryhuber, Gloria S., Jones, Robert C., Quake, Stephen R., Cornfield, David N., Alvira, Cristina M.
Publicado 2023

Virus-inclusive single-cell RNA sequencing reveals the molecular signature of progression to severe dengue

por Zanini, Fabio, Robinson, Makeda L., Croote, Derek, Sahoo, Malaya Kumar, Sanz, Ana Maria, Ortiz-Lasso, Eliana, Albornoz, Ludwig Luis, Rosso, Fernando, Montoya, Jose G., Goo, Leslie, Pinsky, Benjamin A., Quake, Stephen R., Einav, Shirit
Publicado 2018

Broadly neutralizing human antibodies against dengue virus identified by single B cell transcriptomics

por Durham, Natasha D, Agrawal, Aditi, Waltari, Eric, Croote, Derek, Zanini, Fabio, Fouch, Mallorie, Davidson, Edgar, Smith, Olivia, Carabajal, Esteban, Pak, John E, Doranz, Benjamin J, Robinson, Makeda, Sanz, Ana M, Albornoz, Ludwig L, Rosso, Fernando, Einav, Shirit, Quake, Stephen R, McCutcheon, Krista M, Goo, Leslie
Publicado 2019

Mesoderm-derived PDGFRA(+) cells regulate the emergence of hematopoietic stem cells in the dorsal aorta

por Chandrakanthan, Vashe, Rorimpandey, Prunella, Zanini, Fabio, Chacon, Diego, Olivier, Jake, Joshi, Swapna, Kang, Young Chan, Knezevic, Kathy, Huang, Yizhou, Qiao, Qiao, Oliver, Rema A., Unnikrishnan, Ashwin, Carter, Daniel R., Lee, Brendan, Brownlee, Chris, Power, Carl, Brink, Robert, Mendez-Ferrer, Simon, Enikolopov, Grigori, Walsh, William, Göttgens, Berthold, Taoudi, Samir, Beck, Dominik, Pimanda, John E.
Publicado 2022

Contribution of mutant HSC clones to immature and mature cells in MDS and CMML, and variations with AZA therapy

por Schnegg-Kaufmann, Annatina S., Thoms, Julie A. I., Bhuyan, Golam Sarower, Hampton, Henry R., Vaughan, Lachlin, Rutherford, Kayleigh, Kakadia, Purvi M., Lee, Hui Mei, Johansson, Emma M. V., Failes, Timothy W., Arndt, Greg M., Koval, Jason, Lindeman, Robert, Warburton, Pauline, Rodriguez-Meira, Alba, Mead, Adam J., Unnikrishnan, Ashwin, Davidson, Sarah, Polizzotto, Mark N., Hertzberg, Mark, Papaemmanuil, Elli, Bohlander, Stefan K., Faridani, Omid R., Jolly, Christopher J., Zanini, Fabio, Pimanda, John E.
Publicado 2023