Analysis of Genome-scale Expression Network in Four Major Bacterial Residents of Cystic Fibrosis Lung

por Hosseinkhan, Nazanin, Zarrineh, Peyman, Masoudi-Nejad, Ali
Publicado 2014

Improving protein complex prediction by reconstructing a high-confidence protein-protein interaction network of Escherichia coli from different physical interaction data sources

por Taghipour, Shirin, Zarrineh, Peyman, Ganjtabesh, Mohammad, Nowzari-Dalini, Abbas
Publicado 2017

Draft Genome Sequence of Pseudomonas fluorescens LMG 5329, a White Line-Inducing Principle-Producing Bioindicator for the Mushroom Pathogen Pseudomonas tolaasii

por Ghequire, Maarten G. K., Rokni-Zadeh, Hassan, Zarrineh, Peyman, De Mot, René
Publicado 2013

Molecular Characterization of HOXA2 and HOXA3 Binding Properties

por Mallen, Joshua, Kalsan, Manisha, Zarrineh, Peyman, Bridoux, Laure, Ahmad, Shandar, Bobola, Nicoletta
Publicado 2021

Genome-Scale Co-Expression Network Comparison across Escherichia coli and Salmonella enterica Serovar Typhimurium Reveals Significant Conservation at the Regulon Level of Local Reg...

por Zarrineh, Peyman, Sánchez-Rodríguez, Aminael, Hosseinkhan, Nazanin, Narimani, Zahra, Marchal, Kathleen, Masoudi-Nejad, Ali
Publicado 2014

COMODO: an adaptive coclustering strategy to identify conserved coexpression modules between organisms

por Zarrineh, Peyman, Fierro, Ana C, Sánchez-Rodríguez, Aminael, De Moor, Bart, Engelen, Kristof, Marchal, Kathleen
Publicado 2011

Uncovering tissue-specific binding features from differential deep learning

por Phuycharoen, Mike, Zarrineh, Peyman, Bridoux, Laure, Amin, Shilu, Losa, Marta, Chen, Ke, Bobola, Nicoletta, Rattray, Magnus
Publicado 2020

A tissue-specific, Gata6-driven transcriptional program instructs remodeling of the mature arterial tree

por Losa, Marta, Latorre, Victor, Andrabi, Munazah, Ladam, Franck, Sagerström, Charles, Novoa, Ana, Zarrineh, Peyman, Bridoux, Laure, Hanley, Neil A, Mallo, Moises, Bobola, Nicoletta
Publicado 2017

Analysis of chromatin organization and gene expression in T cells identifies functional genes for rheumatoid arthritis

por Yang, Jing, McGovern, Amanda, Martin, Paul, Duffus, Kate, Ge, Xiangyu, Zarrineh, Peyman, Morris, Andrew P., Adamson, Antony, Fraser, Peter, Rattray, Magnus, Eyre, Stephen
Publicado 2020

HOX paralogs selectively convert binding of ubiquitous transcription factors into tissue-specific patterns of enhancer activation

por Bridoux, Laure, Zarrineh, Peyman, Mallen, Joshua, Phuycharoen, Mike, Latorre, Victor, Ladam, Frank, Losa, Marta, Baker, Syed Murtuza, Sagerstrom, Charles, Mace, Kimberly A., Rattray, Magnus, Bobola, Nicoletta
Publicado 2020

A spatio-temporally constrained gene regulatory network directed by PBX1/2 acquires limb patterning specificity via HAND2

por Losa, Marta, Barozzi, Iros, Osterwalder, Marco, Hermosilla-Aguayo, Viviana, Morabito, Angela, Chacón, Brandon H., Zarrineh, Peyman, Girdziusaite, Ausra, Benazet, Jean Denis, Zhu, Jianjian, Mackem, Susan, Capellini, Terence D., Dickel, Diane, Bobola, Nicoletta, Zuniga, Aimée, Visel, Axel, Zeller, Rolf, Selleri, Licia
Publicado 2023

Dynamic changes in the epigenomic landscape regulate human organogenesis and link to developmental disorders

por Gerrard, Dave T., Berry, Andrew A., Jennings, Rachel E., Birket, Matthew J., Zarrineh, Peyman, Garstang, Myles G., Withey, Sarah L., Short, Patrick, Jiménez-Gancedo, Sandra, Firbas, Panos N., Donaldson, Ian, Sharrocks, Andrew D., Hanley, Karen Piper, Hurles, Matthew E., Gomez-Skarmeta, José Luis, Bobola, Nicoletta, Hanley, Neil A.
Publicado 2020