A combinatorial optimization approach for diverse motif finding applications

por Zaslavsky, Elena, Singh, Mona
Publicado 2006

Inferring PDZ Domain Multi-Mutant Binding Preferences from Single-Mutant Data

por Zaslavsky, Elena, Bradley, Philip, Yanover, Chen
Publicado 2010

Advances in the computational landscape for repurposed drugs against COVID-19

por Aronskyy, Illya, Masoudi-Sobhanzadeh, Yosef, Cappuccio, Antonio, Zaslavsky, Elena
Publicado 2021

The Construction and Use of Log-Odds Substitution Scores for Multiple Sequence Alignment

por Altschul, Stephen F., Wootton, John C., Zaslavsky, Elena, Yu, Yi-Kuo
Publicado 2010

Pathway-Level Information ExtractoR (PLIER) for gene expression data

por Mao, Weiguang, Zaslavsky, Elena, Hartmann, Boris M., Sealfon, Stuart C., Chikina, Maria
Publicado 2019

Deciphering the combinatorial landscape of immunity

por Cappuccio, Antonio, Jensen, Shane T, Hartmann, Boris M, Sealfon, Stuart C, Soumelis, Vassili, Zaslavsky, Elena
Publicado 2020

Benchmarking transcriptional host response signatures for infection diagnosis

por Chawla, Daniel G., Cappuccio, Antonio, Tamminga, Andrea, Sealfon, Stuart C., Zaslavsky, Elena, Kleinstein, Steven H.
Publicado 2022

High resolution annotation of zebrafish transcriptome using long-read sequencing

por Nudelman, German, Frasca, Antonio, Kent, Brandon, Sadler, Kirsten C., Sealfon, Stuart C., Walsh, Martin J., Zaslavsky, Elena
Publicado 2018

Reconstruction of regulatory networks through temporal enrichment profiling and its application to H1N1 influenza viral infection

por Zaslavsky, Elena, Nudelman, German, Marquez, Susanna, Hershberg, Uri, Hartmann, Boris M, Thakar, Juilee, Sealfon, Stuart C, Kleinstein, Steven H
Publicado 2013

Comparing Host Module Activation Patterns and Temporal Dynamics in Infection by Influenza H1N1 Viruses

por Nudelman, Irina, Kudrin, Daniil, Nudelman, German, Deshpande, Raamesh, Hartmann, Boris M., Kleinstein, Steven H., Myers, Chad L., Sealfon, Stuart C., Zaslavsky, Elena
Publicado 2021

Multi-omics profiling of single nuclei from frozen archived postmortem human pituitary tissue

por Mendelev, Natalia, Zamojski, Michel, Amper, Mary Anne S., Cheng, Wan Sze, Pincas, Hanna, Nair, Venugopalan D., Zaslavsky, Elena, Sealfon, Stuart C., Ruf-Zamojski, Frederique
Publicado 2022

Automated single-cell omics end-to-end framework with data-driven batch inference

por Wang, Yuan, Thistlethwaite, William, Tadych, Alicja, Ruf-Zamojski, Frederique, Bernard, Daniel J, Cappuccio, Antonio, Zaslavsky, Elena, Chen, Xi, Sealfon, Stuart C., Troyanskaya, Olga G.
Publicado 2023

Regulatory Architecture of the LβT2 Gonadotrope Cell Underlying the Response to Gonadotropin-Releasing Hormone

por Ruf-Zamojski, Frederique, Fribourg, Miguel, Ge, Yongchao, Nair, Venugopalan, Pincas, Hanna, Zaslavsky, Elena, Nudelman, German, Tuminello, Stephanie J., Watanabe, Hideo, Turgeon, Judith L., Sealfon, Stuart C.
Publicado 2018

Analysis of chromatin accessibility uncovers TEAD1 as a regulator of migration in human glioblastoma

por Tome-Garcia, Jessica, Erfani, Parsa, Nudelman, German, Tsankov, Alexander M., Katsyv, Igor, Tejero, Rut, Bin Zhang, Walsh, Martin, Friedel, Roland H., Zaslavsky, Elena, Tsankova, Nadejda M.
Publicado 2018

Single-cell transcriptional profiles in human skeletal muscle

por Rubenstein, Aliza B., Smith, Gregory R., Raue, Ulrika, Begue, Gwénaëlle, Minchev, Kiril, Ruf-Zamojski, Frederique, Nair, Venugopalan D., Wang, Xingyu, Zhou, Lan, Zaslavsky, Elena, Trappe, Todd A., Trappe, Scott, Sealfon, Stuart C.
Publicado 2020

Prospective Isolation and Comparison of Human Germinal Matrix and Glioblastoma EGFR(+) Populations with Stem Cell Properties

por Tome-Garcia, Jessica, Tejero, Rut, Nudelman, German, Yong, Raymund L., Sebra, Robert, Wang, Huaien, Fowkes, Mary, Magid, Margret, Walsh, Martin, Silva-Vargas, Violeta, Zaslavsky, Elena, Friedel, Roland H., Doetsch, Fiona, Tsankova, Nadejda M.
Publicado 2017

Pandemic H1N1 influenza A viruses suppress immunogenic RIPK3-driven dendritic cell death

por Hartmann, Boris M., Albrecht, Randy A., Zaslavsky, Elena, Nudelman, German, Pincas, Hanna, Marjanovic, Nada, Schotsaert, Michael, Martínez-Romero, Carles, Fenutria, Rafael, Ingram, Justin P., Ramos, Irene, Fernandez-Sesma, Ana, Balachandran, Siddharth, García-Sastre, Adolfo, Sealfon, Stuart C.
Publicado 2017

Understanding multicellular function and disease with human tissue-specific networks

por Greene, Casey S., Krishnan, Arjun, Wong, Aaron K., Ricciotti, Emanuela, Zelaya, Rene A., Himmelstein, Daniel S., Zhang, Ran, Hartmann, Boris M., Zaslavsky, Elena, Sealfon, Stuart C., Chasman, Daniel I., FitzGerald, Garret A., Dolinski, Kara, Grosser, Tilo, Troyanskaya, Olga G.
Publicado 2015

High-resolution transcriptomics informs glial pathology in human temporal lobe epilepsy

por Pai, Balagopal, Tome-Garcia, Jessica, Cheng, Wan Sze, Nudelman, German, Beaumont, Kristin G., Ghatan, Saadi, Panov, Fedor, Caballero, Elodia, Sarpong, Kwadwo, Marcuse, Lara, Yoo, Jiyeoun, Jiang, Yan, Schaefer, Anne, Akbarian, Schahram, Sebra, Robert, Pinto, Dalila, Zaslavsky, Elena, Tsankova, Nadejda M.
Publicado 2022

Correction: High-resolution transcriptomics informs glial pathology in human temporal lobe epilepsy

por Pai, Balagopal, Tome‑Garcia, Jessica, Cheng, Wan Sze, Nudelman, German, Beaumont, Kristin G., Ghatan, Saadi, Panov, Fedor, Caballero, Elodia, Sarpong, Kwadwo, Marcuse, Lara, Yoo, Jiyeoun, Jiang, Yan, Schaefer, Anne, Akbarian, Schahram, Sebra, Robert, Pinto, Dalila, Zaslavsky, Elena, Tsankova, Nadejda M.
Publicado 2022