The Newick utilities: high-throughput phylogenetic tree processing in the Unix shell

por Junier, Thomas, Zdobnov, Evgeny M.
Publicado 2010

A Novel Anphevirus in Aedes albopictus Mosquitoes Is Distributed Worldwide and Interacts with the Host RNA Interference Pathway

por Manni, Mosè, Zdobnov, Evgeny M.
Publicado 2020

miRmap: Comprehensive prediction of microRNA target repression strength

por Vejnar, Charles E., Zdobnov, Evgeny M.
Publicado 2012

CEGA—a catalog of conserved elements from genomic alignments

por Dousse, Aline, Junier, Thomas, Zdobnov, Evgeny M.
Publicado 2016

LEMMI: a continuous benchmarking platform for metagenomics classifiers

por Seppey, Mathieu, Manni, Mosè, Zdobnov, Evgeny M.
Publicado 2020

Comprehensive mouse microbiota genome catalog reveals major difference to its human counterpart

por Kieser, Silas, Zdobnov, Evgeny M., Trajkovski, Mirko
Publicado 2022

A remarkably stable TipE gene cluster: evolution of insect Para sodium channel auxiliary subunits

por Li, Jia, Waterhouse, Robert M, Zdobnov, Evgeny M
Publicado 2011

miRmap web: comprehensive microRNA target prediction online

por Vejnar, Charles E., Blum, Matthias, Zdobnov, Evgeny M.
Publicado 2013

Correlating Traits of Gene Retention, Sequence Divergence, Duplicability and Essentiality in Vertebrates, Arthropods, and Fungi

por Waterhouse, Robert M., Zdobnov, Evgeny M., Kriventseva, Evgenia V.
Publicado 2010

OrthoDB: the hierarchical catalog of eukaryotic orthologs

por Kriventseva, Evgenia V., Rahman, Nazim, Espinosa, Octavio, Zdobnov, Evgeny M.
Publicado 2008

Expression profiles of urbilaterian genes uniquely shared between honey bee and vertebrates

por Matsui, Toshiaki, Yamamoto, Toshiyuki, Wyder, Stefan, Zdobnov, Evgeny M, Kadowaki, Tatsuhiko
Publicado 2009

Enterovirus D: A Small but Versatile Species

por Filipe, Ines Cordeiro, Guedes, Mariana Soares, Zdobnov, Evgeny M., Tapparel, Caroline
Publicado 2021

Quantification of ortholog losses in insects and vertebrates

por Wyder, Stefan, Kriventseva, Evgenia V, Schröder, Reinhard, Kadowaki, Tatsuhiko, Zdobnov, Evgeny M
Publicado 2007

Protein coding potential of retroviruses and other transposable elements in vertebrate genomes

por Zdobnov, Evgeny M., Campillos, Mónica, Harrington, Eoghan D., Torrents, David, Bork, Peer
Publicado 2005

miROrtho: computational survey of microRNA genes

por Gerlach, Daniel, Kriventseva, Evgenia V., Rahman, Nazim, Vejnar, Charles E., Zdobnov, Evgeny M.
Publicado 2009

OrthoDB: the hierarchical catalog of eukaryotic orthologs in 2011

por Waterhouse, Robert M., Zdobnov, Evgeny M., Tegenfeldt, Fredrik, Li, Jia, Kriventseva, Evgenia V.
Publicado 2011

OrthoDB: a hierarchical catalog of animal, fungal and bacterial orthologs

por Waterhouse, Robert M., Tegenfeldt, Fredrik, Li, Jia, Zdobnov, Evgeny M., Kriventseva, Evgenia V.
Publicado 2013

ATLAS: a Snakemake workflow for assembly, annotation, and genomic binning of metagenome sequence data

por Kieser, Silas, Brown, Joseph, Zdobnov, Evgeny M., Trajkovski, Mirko, McCue, Lee Ann
Publicado 2020

BUSCO Update: Novel and Streamlined Workflows along with Broader and Deeper Phylogenetic Coverage for Scoring of Eukaryotic, Prokaryotic, and Viral Genomes

por Manni, Mosè, Berkeley, Matthew R, Seppey, Mathieu, Simão, Felipe A, Zdobnov, Evgeny M
Publicado 2021

OrthoDB in 2020: evolutionary and functional annotations of orthologs

por Zdobnov, Evgeny M, Kuznetsov, Dmitry, Tegenfeldt, Fredrik, Manni, Mosè, Berkeley, Matthew, Kriventseva, Evgenia V
Publicado 2020