MEDIPIPE: an automated and comprehensive pipeline for cfMeDIP-seq data quality control and analysis

por Zeng, Yong, Ye, Wenbin, Stutheit-Zhao, Eric Y, Han, Ming, Bratman, Scott V, Pugh, Trevor J, He, Housheng Hansen
Publicado 2023

Integrated, Longitudinal Analysis of Cell-free DNA in Uveal Melanoma

por Wong, Derek, Luo, Ping, Znassi, Nadia, Arteaga, Diana P., Gray, Diana, Danesh, Arnavaz, Han, Ming, Zhao, Eric Y., Pedersen, Stephanie, Prokopec, Stephenie, Sundaravadanam, Yogi, Torti, Dax, Marsh, Kayla, Keshavarzi, Sareh, Xu, Wei, Krema, Hatem, Joshua, Anthony M., Butler, Marcus O., Pugh, Trevor J.
Publicado 2023

Genomic characterization of a well-differentiated grade 3 pancreatic neuroendocrine tumor

por Williamson, Laura M., Steel, Michael, Grewal, Jasleen K., Thibodeau, My Lihn, Zhao, Eric Y., Loree, Jonathan M., Yang, Kevin C., Gorski, Sharon M., Mungall, Andrew J., Mungall, Karen L., Moore, Richard A., Marra, Marco A., Laskin, Janessa, Renouf, Daniel J., Schaeffer, David F., Jones, Steven J.M.
Publicado 2019

Molecular characterization of metastatic pancreatic neuroendocrine tumors (PNETs) using whole-genome and transcriptome sequencing

por Wong, Hui-li, Yang, Kevin C., Shen, Yaoqing, Zhao, Eric Y., Loree, Jonathan M., Kennecke, Hagen F., Kalloger, Steve E., Karasinska, Joanna M., Lim, Howard J., Mungall, Andrew J., Feng, Xiaolan, Davies, Janine M., Schrader, Kasmintan, Zhou, Chen, Karsan, Aly, Jones, Steven J.M., Laskin, Janessa, Marra, Marco A., Schaeffer, David F., Gorski, Sharon M., Renouf, Daniel J.
Publicado 2018

Genome-wide discovery of somatic regulatory variants in diffuse large B-cell lymphoma

por Arthur, Sarah E., Jiang, Aixiang, Grande, Bruno M., Alcaide, Miguel, Cojocaru, Razvan, Rushton, Christopher K., Mottok, Anja, Hilton, Laura K., Lat, Prince Kumar, Zhao, Eric Y., Culibrk, Luka, Ennishi, Daisuke, Jessa, Selin, Chong, Lauren, Thomas, Nicole, Pararajalingam, Prasath, Meissner, Barbara, Boyle, Merrill, Davidson, Jordan, Bushell, Kevin R., Lai, Daniel, Farinha, Pedro, Slack, Graham W., Morin, Gregg B., Shah, Sohrab, Sen, Dipankar, Jones, Steven J. M., Mungall, Andrew J., Gascoyne, Randy D., Audas, Timothy E., Unrau, Peter, Marra, Marco A., Connors, Joseph M., Steidl, Christian, Scott, David W., Morin, Ryan D.
Publicado 2018

Base excision repair deficiency signatures implicate germline and somatic MUTYH aberrations in pancreatic ductal adenocarcinoma and breast cancer oncogenesis

por Thibodeau, My Linh, Zhao, Eric Y., Reisle, Caralyn, Ch'ng, Carolyn, Wong, Hui-Li, Shen, Yaoqing, Jones, Martin R., Lim, Howard J., Young, Sean, Cremin, Carol, Pleasance, Erin, Zhang, Wei, Holt, Robert, Eirew, Peter, Karasinska, Joanna, Kalloger, Steve E., Taylor, Greg, Majounie, Elisa, Bonakdar, Melika, Zong, Zusheng, Bleile, Dustin, Chiu, Readman, Birol, Inanc, Gelmon, Karen, Lohrisch, Caroline, Mungall, Karen L., Mungall, Andrew J., Moore, Richard, Ma, Yussanne P., Fok, Alexandra, Yip, Stephen, Karsan, Aly, Huntsman, David, Schaeffer, David F., Laskin, Janessa, Marra, Marco A., Renouf, Daniel J., Jones, Steven J.M., Schrader, Kasmintan A.
Publicado 2019

Frequent mutation of histone modifying genes in non-Hodgkin lymphoma

por Morin, Ryan D., Mendez-Lago, Maria, Mungall, Andrew J., Goya, Rodrigo, Mungall, Karen L., Corbett, Richard, Johnson, Nathalie A., Severson, Tesa M., Chiu, Readman, Field, Matthew, Jackman, Shaun, Krzywinski, Martin, Scott, David W., Trinh, Diane L., Tamura-Wells, Jessica, Li, Sa, Firme, Marlo, Rogic, Sanja, Griffith, Malachi, Chan, Susanna, Yakovenko, Oleksandr, Meyer, Irmtraud M., Zhao, Eric Y., Smailus, Duane, Moksa, Michelle, Chittaranjan, Suganthi, Rimsza, Lisa, Brooks-Wilson, Angela, Spinelli, John J., Ben-Neriah, Susana, Meissner, Barbara, Woolcock, Bruce, Boyle, Merrill, McDonald, Helen, Tam, Angela, Zhao, Yongjun, Delaney, Allen, Zeng, Thomas, Tse, Kane, Butterfield, Yaron, Birol, Inanc, Holt, Rob, Schein, Jacqueline, Horsman, Douglas E., Moore, Richard, Jones, Steven J.M., Connors, Joseph M., Hirst, Martin, Gascoyne, Randy D., Marra, Marco A.
Publicado 2011