HGTector: an automated method facilitating genome-wide discovery of putative horizontal gene transfers

por Zhu, Qiyun, Kosoy, Michael, Dittmar, Katharina
Publicado 2014

Improved accuracy of supervised CRM discovery with interpolated Markov models and cross-species comparison

por Kazemian, Majid, Zhu, Qiyun, Halfon, Marc S., Sinha, Saurabh
Publicado 2011

Horizontal Transfers and Gene Losses in the Phospholipid Pathway of Bartonella Reveal Clues about Early Ecological Niches

por Zhu, Qiyun, Kosoy, Michael, Olival, Kevin J., Dittmar, Katharina
Publicado 2014

On the probability of dinosaur fleas

por Dittmar, Katharina, Zhu, Qiyun, Hastriter, Michael W., Whiting, Michael F.
Publicado 2016

BinaRena: a dedicated interactive platform for human-guided exploration and binning of metagenomes

por Pavia, Michael J., Chede, Abhinav, Wu, Zijun, Cadillo-Quiroz, Hinsby, Zhu, Qiyun
Publicado 2023

RNA: An Expanding View of Function and Evolution

por Han, Xinwei, Chen, Yuan, Wang, Liuyang, Fang, Wenwen, Zhang, Ning, Zhu, Qiyun
Publicado 2016

Web-based bioinformatics workflows for end-to-end RNA-seq data computation and analysis in agricultural animal species

por Li, Weizhong, Richter, R. Alexander, Jung, Yunsup, Zhu, Qiyun, Li, Robert W.
Publicado 2016

Two single amino acid substitutions in the intervening region of Newcastle disease virus HN protein attenuate viral replication and pathogenicity

por Liu, Bin, Ji, Yanhong, Lin, Zhongqing, Fu, Yuguang, Muhammad Dafallah, Rihab, Zhu, Qiyun
Publicado 2015

H1N1 Influenza A Virus Protein NS2 Inhibits Innate Immune Response by Targeting IRF7

por Zhang, Bo, Liu, Minxuan, Huang, Jiaxin, Zeng, Qiaoying, Zhu, Qiyun, Xu, Shuai, Chen, Hualan
Publicado 2022

Comparative Pathogenicity and Transmissibility of Pandemic H1N1, Avian H5N1, and Human H7N9 Influenza Viruses in Tree Shrews

por Xu, Shuai, Li, Xuyong, Yang, Jiayun, Wang, Zhengxiang, Jia, Yane, Han, Lu, Wang, Liang, Zhu, Qiyun
Publicado 2019

Microbiome and metabolome profiles of high screen time in a cohort of healthy college students

por Jasbi, Paniz, Mohr, Alex E., Shi, Xiaojian, Mahmood, Tara, Zhu, Qiyun, Bruening, Meg, Gu, Haiwei, Whisner, Corrie
Publicado 2022

Location-specific signatures of Crohn’s disease at a multi-omics scale

por Gonzalez, Carlos G., Mills, Robert H., Zhu, Qiyun, Sauceda, Consuelo, Knight, Rob, Dulai, Parambir S., Gonzalez, David J.
Publicado 2022

Bartonella spp. in Fruit Bats and Blood-Feeding Ectoparasites in Madagascar

por Brook, Cara E., Bai, Ying, Dobson, Andrew P., Osikowicz, Lynn M., Ranaivoson, Hafaliana C., Zhu, Qiyun, Kosoy, Michael Y., Dittmar, Katharina
Publicado 2015

Visualization-assisted binning of metagenome assemblies reveals potential new pathogenic profiles in idiopathic travelers’ diarrhea

por Zhu, Qiyun, Dupont, Christopher L., Jones, Marcus B., Pham, Kevin M., Jiang, Zhi-Dong, DuPont, Herbert L., Highlander, Sarah K.
Publicado 2018

Microbial effects of livestock manure fertilization on freshwater aquaculture ponds rearing tilapia (Oreochromis shiranus) and North African catfish (Clarias gariepinus)

por Minich, Jeremiah J., Zhu, Qiyun, Xu, Zhenjiang Zech, Amir, Amnon, Ngochera, Maxon, Simwaka, Moses, Allen, Eric E., Zidana, Hastings, Knight, Rob
Publicado 2018

Evaluating Metagenomic Prediction of the Metaproteome in a 4.5-Year Study of a Patient with Crohn's Disease

por Mills, Robert H., Vázquez-Baeza, Yoshiki, Zhu, Qiyun, Jiang, Lingjing, Gaffney, James, Humphrey, Greg, Smarr, Larry, Knight, Rob, Gonzalez, David J.
Publicado 2019

Expanding magnetic organelle biogenesis in the domain Bacteria

por Lin, Wei, Zhang, Wensi, Paterson, Greig A., Zhu, Qiyun, Zhao, Xiang, Knight, Rob, Bazylinski, Dennis A., Roberts, Andrew P., Pan, Yongxin
Publicado 2020

Evaluating the Information Content of Shallow Shotgun Metagenomics

por Hillmann, Benjamin, Al-Ghalith, Gabriel A., Shields-Cutler, Robin R., Zhu, Qiyun, Gohl, Daryl M., Beckman, Kenneth B., Knight, Rob, Knights, Dan
Publicado 2018

MicroRNA-200c-targeted contactin 1 facilitates the replication of influenza A virus by accelerating the degradation of MAVS

por Xu, Shuai, Han, Lu, Wei, Yanli, Zhang, Bo, Wang, Qian, Liu, Junwen, Liu, Minxuan, Chen, Zhaoshan, Wang, Zhengxiang, Chen, Hualan, Zhu, Qiyun
Publicado 2022

USP49 negatively regulates cellular antiviral responses via deconjugating K63-linked ubiquitination of MITA

por Ye, Liya, Zhang, Qiang, Liuyu, Tianzi, Xu, Zhigao, Zhang, Meng-Xin, Luo, Min-Hua, Zeng, Wen-Bo, Zhu, Qiyun, Lin, Dandan, Zhong, Bo
Publicado 2019