Elucidating Syntrophic Butyrate-Degrading Populations in Anaerobic Digesters Using Stable-Isotope-Informed Genome-Resolved Metagenomics

por Ziels, Ryan M., Nobu, Masaru K., Sousa, Diana Z.
Publicado 2019

Integrating Genome-Resolved Metagenomics with Trait-Based Process Modeling to Determine Biokinetics of Distinct Nitrifying Communities within Activated Sludge

por Sampara, Pranav, Luo, Yaqian, Lin, Xuan, Ziels, Ryan M.
Publicado 2022

Activity-Based Cell Sorting Reveals Resistance of Functionally Degenerate Nitrospira during a Press Disturbance in Nitrifying Activated Sludge

por Madill, Maxwell B. W., Luo, Yaqian, Sampara, Pranav, Ziels, Ryan M.
Publicado 2021

DNA-SIP based genome-centric metagenomics identifies key long-chain fatty acid-degrading populations in anaerobic digesters with different feeding frequencies

por Ziels, Ryan M, Sousa, Diana Z, Stensel, H David, Beck, David A C
Publicado 2018

Microbial rRNA gene expression and co‐occurrence profiles associate with biokinetics and elemental composition in full‐scale anaerobic digesters

por Ziels, Ryan M., Svensson, Bo H., Sundberg, Carina, Larsson, Madeleine, Karlsson, Anna, Yekta, Sepehr Shakeri
Publicado 2018

Functional Insights of Salinity Stress-Related Pathways in Metagenome-Resolved Methanothrix Genomes

por Gagliano, Maria Cristina, Sampara, Pranav, Plugge, Caroline M., Temmink, Hardy, Sudmalis, Dainis, Ziels, Ryan M.
Publicado 2022

Complete Genome Sequence of Phormidium yuhuli AB48, Isolated from an Industrial Photobioreactor Environment

por Qiu, Yilin, Noonan, Avery J. C., Dofher, Kalen, Koch, Moritz, Kieft, Brandon, Lin, Xuan, Ziels, Ryan M., Hallam, Steven J.
Publicado 2023

Assessing Multiplex Tiling PCR Sequencing Approaches for Detecting Genomic Variants of SARS-CoV-2 in Municipal Wastewater

por Lin, Xuan, Glier, Melissa, Kuchinski, Kevin, Ross-Van Mierlo, Tenysha, McVea, David, Tyson, John R., Prystajecky, Natalie, Ziels, Ryan M.
Publicado 2021

New insights from the biogas microbiome by comprehensive genome-resolved metagenomics of nearly 1600 species originating from multiple anaerobic digesters

por Campanaro, Stefano, Treu, Laura, Rodriguez-R, Luis M., Kovalovszki, Adam, Ziels, Ryan M., Maus, Irena, Zhu, Xinyu, Kougias, Panagiotis G., Basile, Arianna, Luo, Gang, Schlüter, Andreas, Konstantinidis, Konstantinos T., Angelidaki, Irini
Publicado 2020

Diverse electron carriers drive syntrophic interactions in an enriched anaerobic acetate-oxidizing consortium

por McDaniel, Elizabeth A., Scarborough, Matthew, Mulat, Daniel Girma, Lin, Xuan, Sampara, Pranav S., Olson, Heather M., Young, Robert P., Eder, Elizabeth K., Attah, Isaac K., Markillie, Lye Meng, Hoyt, David W., Lipton, Mary S., Hallam, Steven J., Ziels, Ryan M.
Publicado 2023

A standardized quantitative analysis strategy for stable isotope probing metagenomics

por Vyshenska, Dariia, Sampara, Pranav, Singh, Kanwar, Tomatsu, Andy, Kauffman, W. Berkeley, Nuccio, Erin E., Blazewicz, Steven J., Pett-Ridge, Jennifer, Louie, Katherine B., Varghese, Neha, Kellom, Matthew, Clum, Alicia, Riley, Robert, Roux, Simon, Eloe-Fadrosh, Emiley A., Ziels, Ryan M., Malmstrom, Rex R.
Publicado 2023