Quantifying Shared and Unique Gene Content across 17 Microbial Ecosystems

por Zimmerman, Samuel, Tierney, Braden T., Patel, Chirag J., Kostic, Aleksandar D.
Publicado 2023

Estrogen activates Alzheimer's disease genes

por Ratnakumar, Abhirami, Zimmerman, Samuel E., Jordan, Bryen A., Mar, Jessica C.
Publicado 2019

pathVar: a new method for pathway-based interpretation of gene expression variability

por de Torrente, Laurence, Zimmerman, Samuel, Taylor, Deanne, Hasegawa, Yu, Wells, Christine A., Mar, Jessica C.
Publicado 2017

Stem cell factor is selectively secreted by arterial endothelial cells in bone marrow

por Xu, Chunliang, Gao, Xin, Wei, Qiaozhi, Nakahara, Fumio, Zimmerman, Samuel E., Mar, Jessica, Frenette, Paul S.
Publicado 2018

The shape of gene expression distributions matter: how incorporating distribution shape improves the interpretation of cancer transcriptomic data

por de Torrenté, Laurence, Zimmerman, Samuel, Suzuki, Masako, Christopeit, Maximilian, Greally, John M., Mar, Jessica C.
Publicado 2020

Aneuvis: web-based exploration of numerical chromosomal variation in single cells

por Piqué, Daniel G., Andriani, Grasiella A., Maggi, Elaine, Zimmerman, Samuel E., Greally, John M., Montagna, Cristina, Mar, Jessica C.
Publicado 2019

A direct comparison of interphase FISH versus low-coverage single cell sequencing to detect aneuploidy reveals respective strengths and weaknesses

por Andriani, Grasiella A., Maggi, Elaine, Piqué, Daniel, Zimmerman, Samuel E., Lee, Moonsook, Quispe-Tintaya, Wilber, Maslov, Alexander, Campisi, Judith, Vijg, Jan, Mar, Jessica C., Montagna, Cristina
Publicado 2019

Reconstruction of ancient microbial genomes from the human gut

por Wibowo, Marsha C., Yang, Zhen, Borry, Maxime, Hübner, Alexander, Huang, Kun D., Tierney, Braden T., Zimmerman, Samuel, Barajas-Olmos, Francisco, Contreras-Cubas, Cecilia, García-Ortiz, Humberto, Martínez-Hernández, Angélica, Luber, Jacob M., Kirstahler, Philipp, Blohm, Tre, Smiley, Francis E., Arnold, Richard, Ballal, Sonia A., Pamp, Sünje Johanna, Russ, Julia, Maixner, Frank, Rota-Stabelli, Omar, Segata, Nicola, Reinhard, Karl, Orozco, Lorena, Warinner, Christina, Snow, Meradeth, LeBlanc, Steven, Kostic, Aleksandar D.
Publicado 2021