LegNet: a best-in-class deep learning model for short DNA regulatory regions

por Penzar, Dmitry, Nogina, Daria, Noskova, Elizaveta, Zinkevich, Arsenii, Meshcheryakov, Georgy, Lando, Andrey, Rafi, Abdul Muntakim, de Boer, Carl, Kulakovskiy, Ivan V
Publicado 2023

What Do Neighbors Tell About You: The Local Context of Cis-Regulatory Modules Complicates Prediction of Regulatory Variants

por Penzar, Dmitry D., Zinkevich, Arsenii O., Vorontsov, Ilya E., Sitnik, Vasily V., Favorov, Alexander V., Makeev, Vsevolod J., Kulakovskiy, Ivan V.
Publicado 2019

H3K4me3, H3K9ac, H3K27ac, H3K27me3 and H3K9me3 Histone Tags Suggest Distinct Regulatory Evolution of Open and Condensed Chromatin Landmarks

por Igolkina, Anna A., Zinkevich, Arsenii, Karandasheva, Kristina O., Popov, Aleksey A., Selifanova, Maria V., Nikolaeva, Daria, Tkachev, Victor, Penzar, Dmitry, Nikitin, Daniil M., Buzdin, Anton
Publicado 2019

COVIDomic: A multi-modal cloud-based platform for identification of risk factors associated with COVID-19 severity

por Naumov, Vladimir, Putin, Evgeny, Pushkov, Stefan, Kozlova, Ekaterina, Romantsov, Konstantin, Kalashnikov, Alexander, Galkin, Fedor, Tihonova, Nina, Shneyderman, Anastasia, Galkin, Egor, Zinkevich, Arsenii, Cope, Stephanie M., Sethuraman, Ramanathan, Oprea, Tudor I., Pearson, Alexander T., Tay, Savas, Agrawal, Nishant, Dubovenko, Alexey, Vanhaelen, Quentin, Ozerov, Ivan, Aliper, Alex, Izumchenko, Evgeny, Zhavoronkov, Alex
Publicado 2021