Living in Cold Blood: Arcobacter, Campylobacter, and Helicobacter in Reptiles

por Gilbert, Maarten J., Duim, Birgitta, Zomer, Aldert L., Wagenaar, Jaap A.
Publicado 2019

Draft Genome Sequence of Streptococcus suis S10, a Virulent Strain Used in Experimental Pig Infections

por Gaiser, Rogier A., Zomer, Aldert L., Wells, Jerry M., van Baarlen, Peter
Publicado 2019

RFPlasmid: predicting plasmid sequences from short-read assembly data using machine learning

por van der Graaf-van Bloois, Linda, Wagenaar, Jaap A., Zomer, Aldert L.
Publicado 2021

Editorial: Microbiome and Machine Learning

por Moreno-Indias, Isabel, Zomer, Aldert L., Gómez-Cabrero, David, Claesson, Marcus J.
Publicado 2022

Projector 2: contig mapping for efficient gap-closure of prokaryotic genome sequence assemblies

por van Hijum, Sacha A. F. T., Zomer, Aldert L., Kuipers, Oscar P., Kok, Jan
Publicado 2005

Development of Kaptive databases for Vibrio parahaemolyticus O- and K-antigen genotyping

por van der Graaf-van Bloois, Linda, Chen, Hongyou, Wagenaar, Jaap A., Zomer, Aldert L.
Publicado 2023

Whole genome-based phylogeny of reptile-associated Helicobacter indicates independent niche adaptation followed by diversification in a poikilothermic host

por Gilbert, Maarten J., Duim, Birgitta, Timmerman, Arjen J., Zomer, Aldert L., Wagenaar, Jaap A.
Publicado 2017

Immunomodulation and effects on microbiota after in ovo administration of chicken cathelicidin-2

por Cuperus, Tryntsje, Kraaij, Marina D., Zomer, Aldert L., van Dijk, Albert, Haagsman, Henk P.
Publicado 2018

Comparative Analysis of L-Fucose Utilization and Its Impact on Growth and Survival of Campylobacter Isolates

por Middendorf, Pjotr S., Jacobs-Reitsma, Wilma F., Zomer, Aldert L., den Besten, Heidy M. W., Abee, Tjakko
Publicado 2022

Homologous Recombination between Genetically Divergent Campylobacter fetus Lineages Supports Host-Associated Speciation

por Gilbert, Maarten J, Duim, Birgitta, van der Graaf-van Bloois, Linda, Wagenaar, Jaap A, Zomer, Aldert L
Publicado 2018

Antimicrobial resistance in Campylobacter fetus: emergence and genomic evolution

por van der Graaf-van Bloois, Linda, Duim, Birgitta, Looft, Torey, Veldman, Kees T., Zomer, Aldert L., Wagenaar, Jaap A.
Publicado 2023

Comparative Genomics of Campylobacter iguaniorum to Unravel Genetic Regions Associated with Reptilian Hosts

por Gilbert, Maarten J., Miller, William G., Yee, Emma, Kik, Marja, Zomer, Aldert L., Wagenaar, Jaap A., Duim, Birgitta
Publicado 2016

Safety Evaluation of an Intranasally Applied Cocktail of Lactococcus lactis Strains in Pigs

por Rattigan, Ruth, Wajda, Lukasz, Vlasblom, Abel A., Wolfe, Alan, Zomer, Aldert L., Duim, Birgitta, Wagenaar, Jaap A., Lawlor, Peadar G.
Publicado 2023

Plasmids of Distinct IncK Lineages Show Compatible Phenotypes

por Rozwandowicz, Marta, Brouwer, Michael S. M., Zomer, Aldert L., Bossers, Alex, Harders, Frank, Mevius, Dik J., Wagenaar, Jaap A., Hordijk, Joost
Publicado 2017

After the bite: bacterial transmission from grey seals (Halichoerus grypus) to harbour porpoises (Phocoena phocoena)

por Gilbert, Maarten J., IJsseldijk, Lonneke L., Rubio-García, Ana, Gröne, Andrea, Duim, Birgitta, Rossen, John, Zomer, Aldert L., Wagenaar, Jaap A.
Publicado 2020

Characterising the gut microbiome of stranded harbour seals (Phoca vitulina) in rehabilitation

por Rubio-Garcia, Ana, Zomer, Aldert L., Guo, Ruoshui, Rossen, John W. A., van Zeijl, Jan H., Wagenaar, Jaap A., Luiken, Roosmarijn E. C.
Publicado 2023

Supervised Lowess normalization of comparative genome hybridization data – application to lactococcal strain comparisons

por van Hijum, Sacha AFT, Baerends, Richard JS, Zomer, Aldert L, Karsens, Harma A, Martin-Requena, Victoria, Trelles, Oswaldo, Kok, Jan, Kuipers, Oscar P
Publicado 2008

Campylobacter fetus Subspecies Contain Conserved Type IV Secretion Systems on Multiple Genomic Islands and Plasmids

por van der Graaf–van Bloois, Linda, Miller, William G., Yee, Emma, Gorkiewicz, Gregor, Forbes, Ken J., Zomer, Aldert L., Wagenaar, Jaap A., Duim, Birgitta
Publicado 2016

The Equine Faecal Microbiota of Healthy Horses and Ponies in The Netherlands: Impact of Host and Environmental Factors

por Theelen, Mathijs J. P., Luiken, Roosmarijn E. C., Wagenaar, Jaap A., Sloet van Oldruitenborgh-Oosterbaan, Marianne M., Rossen, John W. A., Zomer, Aldert L.
Publicado 2021

Complete Genome Sequence of a Clinical Campylobacter Isolate Identical to a Novel Campylobacter Species

por Duim, Birgitta, van der Graaf-van Bloois, Linda, Timmerman, Arjen, Wagenaar, Jaap A., Flipse, Jacky, Wallinga, Janny, Bloembergen, Peter, Miller, William G., Zomer, Aldert L.
Publicado 2021