DASPfind: new efficient method to predict drug–target interactions

por Ba-alawi, Wail, Soufan, Othman, Essack, Magbubah, Kalnis, Panos, Bajic, Vladimir B.
Publicado 2016

Creating reproducible pharmacogenomic analysis pipelines

por Mammoliti, Anthony, Smirnov, Petr, Safikhani, Zhaleh, Ba-Alawi, Wail, Haibe-Kains, Benjamin
Publicado 2019

DPubChem: a web tool for QSAR modeling and high-throughput virtual screening

por Soufan, Othman, Ba-alawi, Wail, Magana-Mora, Arturo, Essack, Magbubah, Bajic, Vladimir B.
Publicado 2018

DRABAL: novel method to mine large high-throughput screening assays using Bayesian active learning

por Soufan, Othman, Ba-Alawi, Wail, Afeef, Moataz, Essack, Magbubah, Kalnis, Panos, Bajic, Vladimir B.
Publicado 2016

Mining a database of single amplified genomes from Red Sea brine pool extremophiles—improving reliability of gene function prediction using a profile and pattern matching algorithm...

por Grötzinger, Stefan W., Alam, Intikhab, Ba Alawi, Wail, Bajic, Vladimir B., Stingl, Ulrich, Eppinger, Jörg
Publicado 2014

Mining Chemical Activity Status from High-Throughput Screening Assays

por Soufan, Othman, Ba-alawi, Wail, Afeef, Moataz, Essack, Magbubah, Rodionov, Valentin, Kalnis, Panos, Bajic, Vladimir B.
Publicado 2015

INDIGO – INtegrated Data Warehouse of MIcrobial GenOmes with Examples from the Red Sea Extremophiles

por Alam, Intikhab, Antunes, André, Kamau, Allan Anthony, Ba alawi, Wail, Kalkatawi, Manal, Stingl, Ulrich, Bajic, Vladimir B.
Publicado 2013

PharmacoDB: an integrative database for mining in vitro anticancer drug screening studies

por Smirnov, Petr, Kofia, Victor, Maru, Alexander, Freeman, Mark, Ho, Chantal, El-Hachem, Nehme, Adam, George-Alexandru, Ba-alawi, Wail, Safikhani, Zhaleh, Haibe-Kains, Benjamin
Publicado 2018

Metabolic traits of an uncultured archaeal lineage -MSBL1- from brine pools of the Red Sea

por Mwirichia, Romano, Alam, Intikhab, Rashid, Mamoon, Vinu, Manikandan, Ba-Alawi, Wail, Anthony Kamau, Allan, Kamanda Ngugi, David, Göker, Markus, Klenk, Hans-Peter, Bajic, Vladimir, Stingl, Ulrich
Publicado 2016

Evaluation of statistical approaches for association testing in noisy drug screening data

por Smirnov, Petr, Smith, Ian, Safikhani, Zhaleh, Ba-alawi, Wail, Khodakarami, Farnoosh, Lin, Eva, Yu, Yihong, Martin, Scott, Ortmann, Janosch, Aittokallio, Tero, Hafner, Marc, Haibe-Kains, Benjamin
Publicado 2022

Effects of cytosine methylation on transcription factor binding sites

por Medvedeva, Yulia A, Khamis, Abdullah M, Kulakovskiy, Ivan V, Ba-Alawi, Wail, Bhuyan, Md Shariful I, Kawaji, Hideya, Lassmann, Timo, Harbers, Matthias, Forrest, Alistair RR, Bajic, Vladimir B
Publicado 2014

HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models

por Kulakovskiy, Ivan V., Vorontsov, Ilya E., Yevshin, Ivan S., Soboleva, Anastasiia V., Kasianov, Artem S., Ashoor, Haitham, Ba-alawi, Wail, Bajic, Vladimir B., Medvedeva, Yulia A., Kolpakov, Fedor A., Makeev, Vsevolod J.
Publicado 2016

Computational pharmacogenomic screen identifies drugs that potentiate the anti-breast cancer activity of statins

por van Leeuwen, Jenna E., Ba-Alawi, Wail, Branchard, Emily, Cruickshank, Jennifer, Schormann, Wiebke, Longo, Joseph, Silvester, Jennifer, Gross, Peter L., Andrews, David W., Cescon, David W., Haibe-Kains, Benjamin, Penn, Linda Z., Gendoo, Deena M. A.
Publicado 2022

Biomimetic hydrogel supports initiation and growth of patient-derived breast tumor organoids

por Prince, Elisabeth, Cruickshank, Jennifer, Ba-Alawi, Wail, Hodgson, Kelsey, Haight, Jillian, Tobin, Chantal, Wakeman, Andrew, Avoulov, Alona, Topolskaia, Valentina, Elliott, Mitchell J., McGuigan, Alison P., Berman, Hal K., Haibe-Kains, Benjamin, Cescon, David W., Kumacheva, Eugenia
Publicado 2022

The spindle assembly checkpoint is a therapeutic vulnerability of CDK4/6 inhibitor–resistant ER(+) breast cancer with mitotic aberrations

por Soria-Bretones, Isabel, Thu, Kelsie L., Silvester, Jennifer, Cruickshank, Jennifer, El Ghamrasni, Samah, Ba-alawi, Wail, Fletcher, Graham C., Kiarash, Reza, Elliott, Mitchell J., Chalmers, Jordan J., Elia, Andrea C., Cheng, Albert, Rose, April A. N., Bray, Mark R., Haibe-Kains, Benjamin, Mak, Tak W., Cescon, David W.
Publicado 2022

GLUT1 inhibition blocks growth of RB1-positive triple negative breast cancer

por Wu, Qin, ba-alawi, Wail, Deblois, Genevieve, Cruickshank, Jennifer, Duan, Shili, Lima-Fernandes, Evelyne, Haight, Jillian, Tonekaboni, Seyed Ali Madani, Fortier, Anne-Marie, Kuasne, Hellen, McKee, Trevor D., Mahmoud, Hassan, Kushida, Michelle, Cameron, Sarina, Dogan-Artun, Nergiz, Chen, WenJun, Nie, Yan, Zhang, Lan Xin, Vellanki, Ravi N., Zhou, Stanley, Prinos, Panagiotis, Wouters, Bradly G., Dirks, Peter B., Done, Susan J., Park, Morag, Cescon, David W., Haibe-Kains, Benjamin, Lupien, Mathieu, Arrowsmith, Cheryl H.
Publicado 2020

PRMT inhibition induces a viral mimicry response in triple-negative breast cancer

por Wu, Qin, Nie, David Y., Ba-alawi, Wail, Ji, YiShuai, Zhang, ZiWen, Cruickshank, Jennifer, Haight, Jillian, Ciamponi, Felipe E., Chen, Jocelyn, Duan, Shili, Shen, Yudao, Liu, Jing, Marhon, Sajid A., Mehdipour, Parinaz, Szewczyk, Magdalena M., Dogan-Artun, Nergiz, Chen, WenJun, Zhang, Lan Xin, Deblois, Genevieve, Prinos, Panagiotis, Massirer, Katlin B., Barsyte-Lovejoy, Dalia, Jin, Jian, De Carvalho, Daniel D., Haibe-Kains, Benjamin, Wang, XiaoJia, Cescon, David W., Lupien, Mathieu, Arrowsmith, Cheryl H.
Publicado 2022

ONECUT2 is a driver of neuroendocrine prostate cancer

por Guo, Haiyang, Ci, Xinpei, Ahmed, Musaddeque, Hua, Junjie Tony, Soares, Fraser, Lin, Dong, Puca, Loredana, Vosoughi, Aram, Xue, Hui, Li, Estelle, Su, Peiran, Chen, Sujun, Nguyen, Tran, Liang, Yi, Zhang, Yuzhe, Xu, Xin, Xu, Jing, Sheahan, Anjali V., Ba-Alawi, Wail, Zhang, Si, Mahamud, Osman, Vellanki, Ravi N., Gleave, Martin, Bristow, Robert G., Haibe-Kains, Benjamin, Poirier, John T., Rudin, Charles M., Tsao, Ming-Sound, Wouters, Bradly G., Fazli, Ladan, Feng, Felix Y., Ellis, Leigh, van der Kwast, Theo, Berlin, Alejandro, Koritzinsky, Marianne, Boutros, Paul C., Zoubeidi, Amina, Beltran, Himisha, Wang, Yuzhuo, He, Housheng Hansen
Publicado 2019

PRMT5 inhibition disrupts splicing and stemness in glioblastoma

por Sachamitr, Patty, Ho, Jolene C., Ciamponi, Felipe E., Ba-Alawi, Wail, Coutinho, Fiona J., Guilhamon, Paul, Kushida, Michelle M., Cavalli, Florence M. G., Lee, Lilian, Rastegar, Naghmeh, Vu, Victoria, Sánchez-Osuna, María, Coulombe-Huntington, Jasmin, Kanshin, Evgeny, Whetstone, Heather, Durand, Mathieu, Thibault, Philippe, Hart, Kirsten, Mangos, Maria, Veyhl, Joseph, Chen, Wenjun, Tran, Nhat, Duong, Bang-Chi, Aman, Ahmed M., Che, Xinghui, Lan, Xiaoyang, Whitley, Owen, Zaslaver, Olga, Barsyte-Lovejoy, Dalia, Richards, Laura M., Restall, Ian, Caudy, Amy, Röst, Hannes L., Bonday, Zahid Quyoom, Bernstein, Mark, Das, Sunit, Cusimano, Michael D., Spears, Julian, Bader, Gary D., Pugh, Trevor J., Tyers, Mike, Lupien, Mathieu, Haibe-Kains, Benjamin, Artee Luchman, H., Weiss, Samuel, Massirer, Katlin B., Prinos, Panagiotis, Arrowsmith, Cheryl H., Dirks, Peter B.
Publicado 2021