FUNAGE-Pro: comprehensive web server for gene set enrichment analysis of prokaryotes

por de Jong, Anne, Kuipers, Oscar P, Kok, Jan
Publicado 2022

Draft Genome Sequences of a Bacillus subtilis Strain, a Bacillus velezensis Strain, a Paenibacillus Strain, and an Acinetobacter baumannii Strain, All Isolated from the Phyllospher...

por Muñoz, Claudia Y., de Jong, Anne, Kuipers, Oscar P.
Publicado 2021

Complete Genome Sequence of Bacillus amyloliquefaciens Strain BH072, Isolated from Honey

por Zhao, Xin, de Jong, Anne, Zhou, Zhijiang, Kuipers, Oscar P.
Publicado 2015

Transcriptome landscape of Lactococcus lactis reveals many novel RNAs including a small regulatory RNA involved in carbon uptake and metabolism

por van der Meulen, Sjoerd B., de Jong, Anne, Kok, Jan
Publicado 2016

Comparative Transcriptomics of Bacillus mycoides Strains in Response to Potato-Root Exudates Reveals Different Genetic Adaptation of Endophytic and Soil Isolates

por Yi, Yanglei, de Jong, Anne, Frenzel, Elrike, Kuipers, Oscar P.
Publicado 2017

Early Transcriptome Response of Lactococcus lactis to Environmental Stresses Reveals Differentially Expressed Small Regulatory RNAs and tRNAs

por van der Meulen, Sjoerd B., de Jong, Anne, Kok, Jan
Publicado 2017

Draft Genome Sequences of Six Bacillus Strains and One Brevibacillus Strain Isolated from the Rhizosphere of Perennial Ryegrass (Lolium perenne)

por Li, Zhibo, Song, Chunxu, de Jong, Anne, Kuipers, Oscar P.
Publicado 2019

Draft Genome Sequences of 10 Paenibacillus and Bacillus sp. Strains Isolated from Healthy Tomato Plants and Rhizosphere Soil

por Zhou, Lu, Song, Chunxu, de Jong, Anne, Kuipers, Oscar P.
Publicado 2019

Identification, Isolation, and Characterization of Medipeptins, Antimicrobial Peptides From Pseudomonas mediterranea EDOX

por Zhou, Lu, de Jong, Anne, Yi, Yunhai, Kuipers, Oscar P.
Publicado 2021

Draft Genome Sequences of Bacillus velezensis Strains AF_3B and OS2, Bacillus amyloliquefaciens Strain BS9, Bacillus halotolerans Strain A1, and Bacillus sp. Strain BS3, Producing...

por Farooq, Syeda Amna, de Jong, Anne, Khaliq, Shazia, Kuipers, Oscar P.
Publicado 2022

BAGEL2: mining for bacteriocins in genomic data

por de Jong, Anne, van Heel, Auke J., Kok, Jan, Kuipers, Oscar P.
Publicado 2010

PePPER: a webserver for prediction of prokaryote promoter elements and regulons

por de Jong, Anne, Pietersma, Hilco, Cordes, Martijn, Kuipers, Oscar P, Kok, Jan
Publicado 2012

T-REx: Transcriptome analysis webserver for RNA-seq Expression data

por de Jong, Anne, van der Meulen, Sjoerd, Kuipers, Oscar P., Kok, Jan
Publicado 2015

Draft Genome Sequences of Two Geobacillus Species Strains, Isolated from Oil Wells and Surface Soil above Oil Pools

por Kaunietis, Arnoldas, de Jong, Anne, Pranckutė, Raminta, Buivydas, Andrius, Kuipers, Oscar P.
Publicado 2016

A Novel Antimicrobial Coating Represses Biofilm and Virulence-Related Genes in Methicillin-Resistant Staphylococcus aureus

por Vaishampayan, Ankita, de Jong, Anne, Wight, Darren J., Kok, Jan, Grohmann, Elisabeth
Publicado 2018

Reconstruction and inference of the Lactococcus lactis MG1363 gene co-expression network

por Omony, Jimmy, de Jong, Anne, Kok, Jan, van Hijum, Sacha A. F. T.
Publicado 2019

Draft Genome Sequences of Three Amino Acid-Secreting Lactococcus lactis Strains

por Hernandez-Valdes, Jhonatan A., de Jong, Anne, Kok, Jan, Kuipers, Oscar P.
Publicado 2020

The Transcriptional and Gene Regulatory Network of Lactococcus lactis MG1363 during Growth in Milk

por de Jong, Anne, Hansen, Morten E., Kuipers, Oscar P., Kilstrup, Mogens, Kok, Jan
Publicado 2013

SporeWeb: an interactive journey through the complete sporulation cycle of Bacillus subtilis

por Eijlander, Robyn T., de Jong, Anne, Krawczyk, Antonina O., Holsappel, Siger, Kuipers, Oscar P.
Publicado 2014

Dynamic sporulation gene co-expression networks for Bacillus subtilis 168 and the food-borne isolate Bacillus amyloliquefaciens: a transcriptomic model

por Omony, Jimmy, de Jong, Anne, Krawczyk, Antonina O., Eijlander, Robyn T., Kuipers, Oscar P.
Publicado 2018