3D hotspots of recurrent retroviral insertions reveal long-range interactions with cancer genes

por Babaei, Sepideh, Akhtar, Waseem, de Jong, Johann, Reinders, Marcel, de Ridder, Jeroen
Publicado 2015

A Computational Approach towards a Gene Regulatory Network for the Developing Nematostella vectensis Gut

por Botman, Daniel, Röttinger, Eric, Martindale, Mark Q., de Jong, Johann, Kaandorp, Jaap A.
Publicado 2014

An Explainable Multimodal Neural Network Architecture for Predicting Epilepsy Comorbidities Based on Administrative Claims Data

por Linden, Thomas, De Jong, Johann, Lu, Chao, Kiri, Victor, Haeffs, Kathrin, Fröhlich, Holger
Publicado 2021

Analysis of a spatial gene expression database for sea anemone Nematostella vectensis during early development

por Botman, Daniel, Jansson, Fredrik, Röttinger, Eric, Martindale, Mark Q., de Jong, Johann, Kaandorp, Jaap A.
Publicado 2015

Applications of DNA integrating elements: Facing the bias bully

por de Jong, Johann, Wessels, Lodewyk F A, van Lohuizen, Maarten, de Ridder, Jeroen, Akhtar, Waseem
Publicado 2015

Towards realizing the vision of precision medicine: AI based prediction of clinical drug response

por de Jong, Johann, Cutcutache, Ioana, Page, Matthew, Elmoufti, Sami, Dilley, Cynthia, Fröhlich, Holger, Armstrong, Martin
Publicado 2021

Multiplexed Cas9 targeting reveals genomic location effects and gRNA-based staggered breaks influencing mutation efficiency

por Gisler, Santiago, Gonçalves, Joana P., Akhtar, Waseem, de Jong, Johann, Pindyurin, Alexey V., Wessels, Lodewyk F. A., van Lohuizen, Maarten
Publicado 2019

Deep learning for clustering of multivariate clinical patient trajectories with missing values

por de Jong, Johann, Emon, Mohammad Asif, Wu, Ping, Karki, Reagon, Sood, Meemansa, Godard, Patrice, Ahmad, Ashar, Vrooman, Henri, Hofmann-Apitius, Martin, Fröhlich, Holger
Publicado 2019

Predicting seizure recurrence after an initial seizure-like episode from routine clinical notes using large language models: a retrospective cohort study

por Beaulieu-Jones, Brett K, Villamar, Mauricio F, Scordis, Phil, Bartmann, Ana Paula, Ali, Waqar, Wissel, Benjamin D, Alsentzer, Emily, de Jong, Johann, Patra, Arijit, Kohane, Isaac
Publicado 2023

Chromatin Landscapes of Retroviral and Transposon Integration Profiles

por de Jong, Johann, Akhtar, Waseem, Badhai, Jitendra, Rust, Alistair G., Rad, Roland, Hilkens, John, Berns, Anton, van Lohuizen, Maarten, Wessels, Lodewyk F. A., de Ridder, Jeroen
Publicado 2014

Computational identification of insertional mutagenesis targets for cancer gene discovery

por de Jong, Johann, de Ridder, Jeroen, van der Weyden, Louise, Sun, Ning, van Uitert, Miranda, Berns, Anton, van Lohuizen, Maarten, Jonkers, Jos, Adams, David J., Wessels, Lodewyk F. A.
Publicado 2011

The small FOXP1 isoform predominantly expressed in activated B cell-like diffuse large B-cell lymphoma and full-length FOXP1 exert similar oncogenic and transcriptional activity in...

por van Keimpema, Martine, Grüneberg, Leonie J., Schilder-Tol, Esther J.M., Oud, Monique E.C.M., Beuling, Esther A., Hensbergen, Paul J., de Jong, Johann, Pals, Steven T., Spaargaren, Marcel
Publicado 2017