From transcriptional landscapes to the identification of biomarkers for robustness

por Abee, Tjakko, Wels, Michiel, de Been, Mark, den Besten, Heidy
Publicado 2011

Recent Recombination Events in the Core Genome Are Associated with Adaptive Evolution in Enterococcus faecium

por de Been, Mark, van Schaik, Willem, Cheng, Lu, Corander, Jukka, Willems, Rob J.
Publicado 2013

Within-Host Evolution of the Dutch High-Prevalent Pseudomonas aeruginosa Clone ST406 during Chronic Colonization of a Patient with Cystic Fibrosis

por van Mansfeld, Rosa, de Been, Mark, Paganelli, Fernanda, Yang, Lei, Bonten, Marc, Willems, Rob
Publicado 2016

Genomics and pathotypes of the many faces of Escherichia coli

por Geurtsen, Jeroen, de Been, Mark, Weerdenburg, Eveline, Zomer, Aldert, McNally, Alan, Poolman, Jan
Publicado 2022

Directional gene flow and ecological separation in Yersinia enterocolitica

por Reuter, Sandra, Corander, Jukka, de Been, Mark, Harris, Simon, Cheng, Lu, Hall, Miquette, Thomson, Nicholas R., McNally, Alan
Publicado 2015

An iterative workflow for mining the human intestinal metaproteome

por Rooijers, Koos, Kolmeder, Carolin, Juste, Catherine, Doré, Joël, de Been, Mark, Boeren, Sjef, Galan, Pilar, Beauvallet, Christian, de Vos, Willem M, Schaap, Peter J
Publicado 2011

Comparative Metaproteomics and Diversity Analysis of Human Intestinal Microbiota Testifies for Its Temporal Stability and Expression of Core Functions

por Kolmeder, Carolin A., de Been, Mark, Nikkilä, Janne, Ritamo, Ilja, Mättö, Jaana, Valmu, Leena, Salojärvi, Jarkko, Palva, Airi, Salonen, Anne, de Vos, Willem M.
Publicado 2012

Faecal Metaproteomic Analysis Reveals a Personalized and Stable Functional Microbiome and Limited Effects of a Probiotic Intervention in Adults

por Kolmeder, Carolin A., Salojärvi, Jarkko, Ritari, Jarmo, de Been, Mark, Raes, Jeroen, Falony, Gwen, Vieira-Silva, Sara, Kekkonen, Riina A., Corthals, Garry L., Palva, Airi, Salonen, Anne, de Vos, Willem M.
Publicado 2016

RNA-seq and Tn-seq reveal fitness determinants of vancomycin-resistant Enterococcus faecium during growth in human serum

por Zhang, Xinglin, de Maat, Vincent, Guzmán Prieto, Ana M., Prajsnar, Tomasz K., Bayjanov, Jumamurat R., de Been, Mark, Rogers, Malbert R. C., Bonten, Marc J. M., Mesnage, Stéphane, Willems, Rob J. L., van Schaik, Willem
Publicado 2017

Dissemination of Cephalosporin Resistance Genes between Escherichia coli Strains from Farm Animals and Humans by Specific Plasmid Lineages

por de Been, Mark, Lanza, Val F., de Toro, María, Scharringa, Jelle, Dohmen, Wietske, Du, Yu, Hu, Juan, Lei, Ying, Li, Ning, Tooming-Klunderud, Ave, Heederik, Dick J. J., Fluit, Ad C., Bonten, Marc J. M., Willems, Rob J. L., de la Cruz, Fernando, van Schaik, Willem
Publicado 2014

Ecological Overlap and Horizontal Gene Transfer in Staphylococcus aureus and Staphylococcus epidermidis

por Méric, Guillaume, Miragaia, Maria, de Been, Mark, Yahara, Koji, Pascoe, Ben, Mageiros, Leonardos, Mikhail, Jane, Harris, Llinos G., Wilkinson, Thomas S., Rolo, Joana, Lamble, Sarah, Bray, James E., Jolley, Keith A., Hanage, William P., Bowden, Rory, Maiden, Martin C.J., Mack, Dietrich, de Lencastre, Hermínia, Feil, Edward J., Corander, Jukka, Sheppard, Samuel K.
Publicado 2015