Population-level integration of single-cell datasets enables multi-scale analysis across samples

por De Donno, Carlo, Hediyeh-Zadeh, Soroor, Moinfar, Amir Ali, Wagenstetter, Marco, Zappia, Luke, Lotfollahi, Mohammad, Theis, Fabian J.
Publicado 2023

Early life adversity shapes social subordination and cell type–specific transcriptomic patterning in the ventral hippocampus

por Kos, Aron, Lopez, Juan Pablo, Bordes, Joeri, de Donno, Carlo, Dine, Julien, Brivio, Elena, Karamihalev, Stoyo, Luecken, Malte D., Almeida-Correa, Suellen, Gasperoni, Serena, Dick, Alec, Miranda, Lucas, Büttner, Maren, Stoffel, Rainer, Flachskamm, Cornelia, Theis, Fabian J., Schmidt, Mathias V., Chen, Alon
Publicado 2023

Predicting cellular responses to complex perturbations in high‐throughput screens

por Lotfollahi, Mohammad, Klimovskaia Susmelj, Anna, De Donno, Carlo, Hetzel, Leon, Ji, Yuge, Ibarra, Ignacio L, Srivatsan, Sanjay R, Naghipourfar, Mohsen, Daza, Riza M, Martin, Beth, Shendure, Jay, McFaline‐Figueroa, Jose L, Boyeau, Pierre, Wolf, F Alexander, Yakubova, Nafissa, Günnemann, Stephan, Trapnell, Cole, Lopez‐Paz, David, Theis, Fabian J
Publicado 2023

Single-cell molecular profiling of all three components of the HPA axis reveals adrenal ABCB1 as a regulator of stress adaptation

por Lopez, Juan Pablo, Brivio, Elena, Santambrogio, Alice, De Donno, Carlo, Kos, Aron, Peters, Miriam, Rost, Nicolas, Czamara, Darina, Brückl, Tanja M., Roeh, Simone, Pöhlmann, Max L., Engelhardt, Clara, Ressle, Andrea, Stoffel, Rainer, Tontsch, Alina, Villamizar, Javier M., Reincke, Martin, Riester, Anna, Sbiera, Silviu, Fassnacht, Martin, Mayberg, Helen S., Craighead, W. Edward, Dunlop, Boadie W., Nemeroff, Charles B., Schmidt, Mathias V., Binder, Elisabeth B., Theis, Fabian J., Beuschlein, Felix, Andoniadou, Cynthia L., Chen, Alon
Publicado 2021

An integrated cell atlas of the lung in health and disease

por Sikkema, Lisa, Ramírez-Suástegui, Ciro, Strobl, Daniel C., Gillett, Tessa E., Zappia, Luke, Madissoon, Elo, Markov, Nikolay S., Zaragosi, Laure-Emmanuelle, Ji, Yuge, Ansari, Meshal, Arguel, Marie-Jeanne, Apperloo, Leonie, Banchero, Martin, Bécavin, Christophe, Berg, Marijn, Chichelnitskiy, Evgeny, Chung, Mei-i, Collin, Antoine, Gay, Aurore C. A., Gote-Schniering, Janine, Hooshiar Kashani, Baharak, Inecik, Kemal, Jain, Manu, Kapellos, Theodore S., Kole, Tessa M., Leroy, Sylvie, Mayr, Christoph H., Oliver, Amanda J., von Papen, Michael, Peter, Lance, Taylor, Chase J., Walzthoeni, Thomas, Xu, Chuan, Bui, Linh T., De Donno, Carlo, Dony, Leander, Faiz, Alen, Guo, Minzhe, Gutierrez, Austin J., Heumos, Lukas, Huang, Ni, Ibarra, Ignacio L., Jackson, Nathan D., Kadur Lakshminarasimha Murthy, Preetish, Lotfollahi, Mohammad, Tabib, Tracy, Talavera-López, Carlos, Travaglini, Kyle J., Wilbrey-Clark, Anna, Worlock, Kaylee B., Yoshida, Masahiro, van den Berge, Maarten, Bossé, Yohan, Desai, Tushar J., Eickelberg, Oliver, Kaminski, Naftali, Krasnow, Mark A., Lafyatis, Robert, Nikolic, Marko Z., Powell, Joseph E., Rajagopal, Jayaraj, Rojas, Mauricio, Rozenblatt-Rosen, Orit, Seibold, Max A., Sheppard, Dean, Shepherd, Douglas P., Sin, Don D., Timens, Wim, Tsankov, Alexander M., Whitsett, Jeffrey, Xu, Yan, Banovich, Nicholas E., Barbry, Pascal, Duong, Thu Elizabeth, Falk, Christine S., Meyer, Kerstin B., Kropski, Jonathan A., Pe’er, Dana, Schiller, Herbert B., Tata, Purushothama Rao, Schultze, Joachim L., Teichmann, Sara A., Misharin, Alexander V., Nawijn, Martijn C., Luecken, Malte D., Theis, Fabian J.
Publicado 2023