Bioinformatic approaches for functional annotation and pathway inference in metagenomics data

por De Filippo, Carlotta, Ramazzotti, Matteo, Fontana, Paolo, Cavalieri, Duccio
Publicado 2012

Explaining Diversity in Metagenomic Datasets by Phylogenetic-Based Feature Weighting

por Albanese, Davide, De Filippo, Carlotta, Cavalieri, Duccio, Donati, Claudio
Publicado 2015

Human microbiome collection

por Pasinetti, Giulio Maria, Turroni, Silvia, Palmieri, Joshua, De Filippo, Carlotta
Publicado 2023

MICCA: a complete and accurate software for taxonomic profiling of metagenomic data

por Albanese, Davide, Fontana, Paolo, De Filippo, Carlotta, Cavalieri, Duccio, Donati, Claudio
Publicado 2015

Dynamic changes in microbiota and mycobiota during spontaneous ‘Vino Santo Trentino’ fermentation

por Stefanini, Irene, Albanese, Davide, Cavazza, Agostino, Franciosi, Elena, De Filippo, Carlotta, Donati, Claudio, Cavalieri, Duccio
Publicado 2016

Effects of Alcohol Binge Drinking and Oleoylethanolamide Pretreatment in the Gut Microbiota

por Rodríguez-González, Alicia, Vitali, Francesco, Moya, Marta, De Filippo, Carlotta, Passani, Maria Beatrice, Orio, Laura
Publicado 2021

Gut microbiota and oleoylethanolamide in the regulation of intestinal homeostasis

por De Filippo, Carlotta, Costa, Alessia, Becagli, Maria Vittoria, Monroy, Mariela Mejia, Provensi, Gustavo, Passani, Maria Beatrice
Publicado 2023

SaccharomycesIDentifier, SID: strain-level analysis of Saccharomyces cerevisiae populations by using microsatellite meta-patterns

por Stefanini, Irene, Albanese, Davide, Sordo, Maddalena, Legras, Jean-Luc, De Filippo, Carlotta, Cavalieri, Duccio, Donati, Claudio
Publicado 2017

Intestinal microbiota profiles in a genetic model of colon tumorigenesis correlates with colon cancer biomarkers

por Vitali, Francesco, Tortora, Katia, Di Paola, Monica, Bartolucci, Gianluca, Menicatti, Marta, De Filippo, Carlotta, Caderni, Giovanna
Publicado 2022

Large-scale genetic variation of the symbiosis-required megaplasmid pSymA revealed by comparative genomic analysis of Sinorhizobium meliloti natural strains

por Giuntini, Elisa, Mengoni, Alessio, De Filippo, Carlotta, Cavalieri, Duccio, Aubin-Horth, Nadia, Landry, Christian R, Becker, Anke, Bazzicalupo, Marco
Publicado 2005

Oleoylethanolamide treatment affects gut microbiota composition and the expression of intestinal cytokines in Peyer’s patches of mice

por Di Paola, Monica, Bonechi, Elena, Provensi, Gustavo, Costa, Alessia, Clarke, Gerard, Ballerini, Clara, De Filippo, Carlotta, Passani, M. Beatrice
Publicado 2018

Letter in response to article in journal of infection: Impact of routine infant BCG vaccination on COVID-19

por Levi, Miriam, Miglietta, Alessandro, Romeo, Gianpaolo, Bartolacci, Simone, Ariani, Filippo, Cipriani, Francesco, De Filippo, Carlotta, Cavalieri, Duccio, Balzi, Daniela
Publicado 2021

Diet, Environments, and Gut Microbiota. A Preliminary Investigation in Children Living in Rural and Urban Burkina Faso and Italy

por De Filippo, Carlotta, Di Paola, Monica, Ramazzotti, Matteo, Albanese, Davide, Pieraccini, Giuseppe, Banci, Elena, Miglietta, Franco, Cavalieri, Duccio, Lionetti, Paolo
Publicado 2017

Isolation, Identification and Characterization of Yeasts from Fermented Goat Milk of the Yaghnob Valley in Tajikistan

por Qvirist, Linnea A., De Filippo, Carlotta, Strati, Francesco, Stefanini, Irene, Sordo, Maddalena, Andlid, Thomas, Felis, Giovanna E., Mattarelli, Paola, Cavalieri, Duccio
Publicado 2016

Study on a Fermented Whole Wheat: Phenolic Content, Activity on PTP1B Enzyme and In Vitro Prebiotic Properties

por Balli, Diletta, Bellumori, Maria, Paoli, Paolo, Pieraccini, Giuseppe, Di Paola, Monica, De Filippo, Carlotta, Di Gioia, Diana, Mulinacci, Nadia, Innocenti, Marzia
Publicado 2019

Semantics of Dairy Fermented Foods: A Microbiologist’s Perspective

por Vitali, Francesco, Zinno, Paola, Schifano, Emily, Gori, Agnese, Costa, Ana, De Filippo, Carlotta, Koroušić Seljak, Barbara, Panov, Panče, Devirgiliis, Chiara, Cavalieri, Duccio
Publicado 2022

Habitat fragmentation is associated to gut microbiota diversity of an endangered primate: implications for conservation

por Barelli, Claudia, Albanese, Davide, Donati, Claudio, Pindo, Massimo, Dallago, Chiara, Rovero, Francesco, Cavalieri, Duccio, Michael Tuohy, Kieran, Christine Hauffe, Heidi, De Filippo, Carlotta
Publicado 2015

Fecal microbiome as determinant of the effect of diet on colorectal cancer risk: comparison of meat-based versus pesco-vegetarian diets (the MeaTIc study)

por Sofi, Francesco, Dinu, Monica, Pagliai, Giuditta, Pierre, Fabrice, Gueraud, Francoise, Bowman, Jildau, Gerard, Philippe, Longo, Vincenzo, Giovannelli, Lisa, Caderni, Giovanna, de Filippo, Carlotta
Publicado 2019

Age and Gender Affect the Composition of Fungal Population of the Human Gastrointestinal Tract

por Strati, Francesco, Di Paola, Monica, Stefanini, Irene, Albanese, Davide, Rizzetto, Lisa, Lionetti, Paolo, Calabrò, Antonio, Jousson, Olivier, Donati, Claudio, Cavalieri, Duccio, De Filippo, Carlotta
Publicado 2016

New evidences on the altered gut microbiota in autism spectrum disorders

por Strati, Francesco, Cavalieri, Duccio, Albanese, Davide, De Felice, Claudio, Donati, Claudio, Hayek, Joussef, Jousson, Olivier, Leoncini, Silvia, Renzi, Daniela, Calabrò, Antonio, De Filippo, Carlotta
Publicado 2017