Rate variation in parasitic plants: correlated and uncorrelated patterns among plastid genes of different function

por Young, Nelson D, dePamphilis, Claude W
Publicado 2005

Compensatory sequence variation between trans-species small RNAs and their target sites

por Johnson, Nathan R, dePamphilis, Claude W, Axtell, Michael J
Publicado 2019

Gene rearrangement analysis and ancestral order inference from chloroplast genomes with inverted repeat

por Yue, Feng, Cui, Liying, dePamphilis, Claude W, Moret, Bernard ME, Tang, Jijun
Publicado 2008

Complete plastid genome sequences suggest strong selection for retention of photosynthetic genes in the parasitic plant genus Cuscuta

por McNeal, Joel R, Kuehl, Jennifer V, Boore, Jeffrey L, de Pamphilis, Claude W
Publicado 2007

The evolution of the plastid chromosome in land plants: gene content, gene order, gene function

por Wicke, Susann, Schneeweiss, Gerald M., dePamphilis, Claude W., Müller, Kai F., Quandt, Dietmar
Publicado 2011

Conservation and divergence of microRNAs in Populus

por Barakat, Abdelali, Wall, Phillip K, DiLoreto, Scott, dePamphilis, Claude W, Carlson, John E
Publicado 2007

De novo characterization of the gametophyte transcriptome in bracken fern, Pteridium aquilinum

por Der, Joshua P, Barker, Michael S, Wickett, Norman J, dePamphilis, Claude W, Wolf, Paul G
Publicado 2011

Genome-wide identification of MST, SUT and SWEET family sugar transporters in root parasitic angiosperms and analysis of their expression during host parasitism

por Misra, Vikram A., Wafula, Eric K., Wang, Yu, dePamphilis, Claude W., Timko, Michael P.
Publicado 2019

Systematics and plastid genome evolution of the cryptically photosynthetic parasitic plant genus Cuscuta (Convolvulaceae)

por McNeal, Joel R, Arumugunathan, Kathiravetpilla, Kuehl, Jennifer V, Boore, Jeffrey L, dePamphilis, Claude W
Publicado 2007

Phylogenetic analysis of pectin-related gene families in Physcomitrella patens and nine other plant species yields evolutionary insights into cell walls

por McCarthy, Thomas W, Der, Joshua P, Honaas, Loren A, dePamphilis, Claude W, Anderson, Charles T
Publicado 2014

SHR4z, a novel decoy effector from the haustorium of the parasitic weed Striga gesnerioides, suppresses host plant immunity

por Su, Chun, Liu, Hai, Wafula, Eric K., Honaas, Loren, de Pamphilis, Claude W., Timko, Michael P.
Publicado 2019

PlantTribes: a gene and gene family resource for comparative genomics in plants

por Wall, P. Kerr, Leebens-Mack, Jim, Müller, Kai F., Field, Dawn, Altman, Naomi S., dePamphilis, Claude W.
Publicado 2008

Parallel Loss of Plastid Introns and Their Maturase in the Genus Cuscuta

por McNeal, Joel R., Kuehl, Jennifer V., Boore, Jeffrey L., Leebens-Mack, Jim, dePamphilis, Claude W.
Publicado 2009

Chasing the hare - Evaluating the phylogenetic utility of a nuclear single copy gene region at and below species level within the species rich group Peperomia (Piperaceae)

por Naumann, Julia, Symmank, Lars, Samain, Marie-Stéphanie, Müller, Kai F, Neinhuis, Christoph, dePamphilis, Claude W, Wanke, Stefan
Publicado 2011

Pervasive Phylogenomic Incongruence Underlies Evolutionary Relationships in Eyebrights (Euphrasia, Orobanchaceae)

por Garrett, Phen, Becher, Hannes, Gussarova, Galina, dePamphilis, Claude W., Ness, Rob W., Gopalakrishnan, Shyam, Twyford, Alex D.
Publicado 2022

Adaptive evolution of chloroplast genome structure inferred using a parametric bootstrap approach

por Cui, Liying, Leebens-Mack, Jim, Wang, Li-San, Tang, Jijun, Rymarquis, Linda, Stern, David B, dePamphilis, Claude W
Publicado 2006

PlantTribes2: Tools for comparative gene family analysis in plant genomics

por Wafula, Eric K., Zhang, Huiting, Von Kuster, Gregory, Leebens-Mack, James H., Honaas, Loren A., dePamphilis, Claude W.
Publicado 2023

ChloroplastDB: the Chloroplast Genome Database

por Cui, Liying, Veeraraghavan, Narayanan, Richter, Alexander, Wall, Kerr, Jansen, Robert K., Leebens-Mack, Jim, Makalowska, Izabela, dePamphilis, Claude W.
Publicado 2006

Gene capture prediction and overlap estimation in EST sequencing from one or multiple libraries

por Wang, Ji-Ping Z, Lindsay, Bruce G, Cui, Liying, Wall, P Kerr, Marion, Josh, Zhang, Jiaxuan, dePamphilis, Claude W
Publicado 2005

Comparative Metabolomics of Early Development of the Parasitic Plants Phelipanche aegyptiaca and Triphysaria versicolor

por Clermont, Kristen, Wang, Yaxin, Liu, Siming, Yang, Zhenzhen, dePamphilis, Claude W., Yoder, John I., Collakova, Eva, Westwood, James H.
Publicado 2019