The multidimensional nature of metagenomics drives interdisciplinary diagnostics

por de Vries, Jutte J.C.
Publicado 2021

Establishing immunogenicity and safety of needle-free intradermal delivery by nanoporous ceramic skin patch of mRNA SARS-CoV-2 vaccine as a revaccination strategy in healthy volunt...

por Prins, Manon L.M., Prins, Corine, de Vries, Jutte J.C., Visser, Leo G., Roukens, Anna H.E.
Publicado 2023

Improved diagnosis of active Schistosoma infection in travellers and migrants using the ultra-sensitive in-house lateral flow test for detection of circulating anodic antigen (CAA)...

por van Grootveld, Rebecca, van Dam, Govert J., de Dood, Claudia, de Vries, Jutte J. C., Visser, Leo G., Corstjens, Paul L. A. M., van Lieshout, Lisette
Publicado 2018

Non-lytic antibiotic treatment in community-acquired pneumococcal pneumonia does not attenuate inflammation: the PRISTINE trial

por Groeneveld, Geert H, van der Reyden, Tanny J, Joosten, Simone A, Bootsma, Hester J, Cobbaert, Christa M, de Vries, Jutte J C, Kuijper, Ed J, van Dissel, Jaap T
Publicado 2019

Coronavirus discovery by metagenomic sequencing: a tool for pandemic preparedness

por Carbo, Ellen C., Sidorov, Igor A., Zevenhoven-Dobbe, Jessika C., Snijder, Eric J., Claas, Eric C., Laros, Jeroen F.J., Kroes, Aloys C.M., de Vries, Jutte J.C.
Publicado 2020

Longitudinal Monitoring of DNA Viral Loads in Transplant Patients Using Quantitative Metagenomic Next-Generation Sequencing

por Carbo, Ellen C., Russcher, Anne, Kraakman, Margriet E. M., de Brouwer, Caroline S., Sidorov, Igor A., Feltkamp, Mariet C. W., Kroes, Aloys C. M., Claas, Eric C. J., de Vries, Jutte J. C.
Publicado 2022

SARS-coronavirus-2 replication in Vero E6 cells: replication kinetics, rapid adaptation and cytopathology

por Ogando, Natacha S., Dalebout, Tim J., Zevenhoven-Dobbe, Jessika C., Limpens, Ronald W.A.L., van der Meer, Yvonne, Caly, Leon, Druce, Julian, de Vries, Jutte J. C., Kikkert, Marjolein, Bárcena, Montserrat, Sidorov, Igor, Snijder, Eric J.
Publicado 2020

Performance of Five Metagenomic Classifiers for Virus Pathogen Detection Using Respiratory Samples from a Clinical Cohort

por Carbo, Ellen C., Sidorov, Igor A., van Rijn-Klink, Anneloes L., Pappas, Nikos, van Boheemen, Sander, Mei, Hailiang, Hiemstra, Pieter S., Eagan, Tomas M., Claas, Eric C. J., Kroes, Aloys C. M., de Vries, Jutte J. C.
Publicado 2022

Retrospective Validation of a Metagenomic Sequencing Protocol for Combined Detection of RNA and DNA Viruses Using Respiratory Samples from Pediatric Patients

por van Boheemen, Sander, van Rijn, Anneloes L., Pappas, Nikos, Carbo, Ellen C., Vorderman, Ruben H.P., Sidorov, Igor, van `t Hof, Peter J., Mei, Hailiang, Claas, Eric C.J., Kroes, Aloys C.M., de Vries, Jutte J.C.
Publicado 2020

Immunoglobulin G1 Fc glycosylation as an early hallmark of severe COVID-19

por Pongracz, Tamas, Nouta, Jan, Wang, Wenjun, van Meijgaarden, Krista E., Linty, Federica, Vidarsson, Gestur, Joosten, Simone A., Ottenhoff, Tom H.M., Hokke, Cornelis H., de Vries, Jutte J.C., Arbous, Sesmu M., Roukens, Anna H.E., Wuhrer, Manfred
Publicado 2022

The respiratory virome and exacerbations in patients with chronic obstructive pulmonary disease

por van Rijn, Anneloes L., van Boheemen, Sander, Sidorov, Igor, Carbo, Ellen C., Pappas, Nikos, Mei, Hailiang, Feltkamp, Mariet, Aanerud, Marianne, Bakke, Per, Claas, Eric C. J., Eagan, Tomas M., Hiemstra, Pieter S., Kroes, Aloys C. M., de Vries, Jutte J. C.
Publicado 2019

Molecular epidemiology and clinical impact of rhinovirus infections in adults during three epidemic seasons in 11 European countries (2007–2010)

por Zlateva, Kalina T, van Rijn, Anneloes L, Simmonds, Peter, Coenjaerts, Frank E J, van Loon, Anton M, Verheij, Theo J M, de Vries, Jutte J C, Little, Paul, Butler, Christopher C, van Zwet, Erik W, Goossens, Herman, Ieven, Margareta, Claas, Eric C J
Publicado 2020

A comparison of five Illumina, Ion Torrent, and nanopore sequencing technology-based approaches for whole genome sequencing of SARS-CoV-2

por Carbo, Ellen C., Mourik, Kees, Boers, Stefan A., Munnink, Bas Oude, Nieuwenhuijse, David, Jonges, Marcel, Welkers, Matthijs R. A., Matamoros, Sebastien, van Harinxma thoe Slooten, Joost, Kraakman, Margriet E. M., Karelioti, Evita, van der Meer, David, Veldkamp, Karin Ellen, Kroes, Aloys C. M., Sidorov, Igor, de Vries, Jutte J. C.
Publicado 2023

Antigen-based diagnosis of Schistosoma infection in travellers: a prospective study

por Casacuberta-Partal, Miriam, Janse, Jacqueline J, van Schuijlenburg, Roos, de Vries, Jutte J C, Erkens, Marianne A A, Suijk, Kitty, van Aalst, Mariëlle, Maas, Jaap J, Grobusch, Martin P, van Genderen, Perry J J, de Dood, Claudia, Corstjens, Paul L A M, van Dam, Govert J, van Lieshout, Lisette, Roestenberg, Meta
Publicado 2020

STROBE-metagenomics: a STROBE extension statement to guide the reporting of metagenomics studies

por Bharucha, Tehmina, Oeser, Clarissa, Balloux, Francois, Brown, Julianne R, Carbo, Ellen C, Charlett, Andre, Chiu, Charles Y, Claas, Eric C J, de Goffau, Marcus C, de Vries, Jutte J C, Eloit, Marc, Hopkins, Susan, Huggett, Jim F, MacCannell, Duncan, Morfopoulou, Sofia, Nath, Avindra, O'Sullivan, Denise M, Reoma, Lauren B, Shaw, Liam P, Sidorov, Igor, Simner, Patricia J, Van Tan, Le, Thomson, Emma C, van Dorp, Lucy, Wilson, Michael R, Breuer, Judith, Field, Nigel
Publicado 2020

Immune Determinants of Viral Clearance in Hospitalised COVID-19 Patients: Reduced Circulating Naïve CD4+ T Cell Counts Correspond with Delayed Viral Clearance

por Zlei, Mihaela, Sidorov, Igor A., Joosten, Simone A., Heemskerk, Mirjam H. M., Myeni, Sebenzile K., Pothast, Cilia R., de Brouwer, Caroline S., Boomaars-van der Zanden, A. Linda, van Meijgaarden, Krista E., Morales, Shessy T., Wessels, Els, Janse, Jacqueline J., Goeman, Jelle J., Cobbaert, Christa M., Kroes, Aloys C. M., Cannegieter, Suzanne C., Roestenberg, Meta, Visser, Leonardus G., Kikkert, Marjolein, Feltkamp, Mariet C. W., Arbous, Sesmu M., Staal, Frank J. T., Ottenhoff, Tom H. M., van Dongen, Jacques J. M., Roukens, Anna H. E., de Vries, Jutte J. C.
Publicado 2022