Integration of a multi-omics stem cell differentiation dataset using a dynamical model

por van den Berg, Patrick R., Bérenger-Currias, Noémie M. L. P., Budnik, Bogdan, Slavov, Nikolai, Semrau, Stefan
Publicado 2023

Integrative genomic analysis in K562 chronic myelogenous leukemia cells reveals that proximal NCOR1 binding positively regulates genes that govern erythroid differentiation and Ima...

por Long, Mark D., van den Berg, Patrick R., Russell, James L., Singh, Prashant K., Battaglia, Sebastiano, Campbell, Moray J.
Publicado 2015

A gastruloid model of the interaction between embryonic and extra-embryonic cell types

por Bérenger-Currias, Noémie MLP, Mircea, Maria, Adegeest, Esmée, van den Berg, Patrick R, Feliksik, Marleen, Hochane, Mazène, Idema, Timon, Tans, Sander J, Semrau, Stefan
Publicado 2022

Allele-specific repression of Sox2 through the long non-coding RNA Sox2ot

por Messemaker, Tobias C., van Leeuwen, Selina M., van den Berg, Patrick R., ‘t Jong, Anke E. J., Palstra, Robert-Jan, Hoeben, Rob C., Semrau, Stefan, Mikkers, Harald M. M.
Publicado 2018

Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development

por Hochane, Mazène, van den Berg, Patrick R., Fan, Xueying, Bérenger-Currias, Noémie, Adegeest, Esmée, Bialecka, Monika, Nieveen, Maaike, Menschaart, Maarten, Chuva de Sousa Lopes, Susana M., Semrau, Stefan
Publicado 2019

The miR-96 and RARγ signaling axis governs androgen signaling and prostate cancer progression

por Long, Mark D., Singh, Prashant K., Russell, James R., Llimos, Gerard, Rosario, Spencer, Rizvi, Abbas, van den Berg, Patrick R., Kirk, Jason, Sucheston-Campbell, Lara E., Smiraglia, Dominic J., Campbell, Moray J.
Publicado 2018

Integration of VDR genome wide binding and GWAS genetic variation data reveals co-occurrence of VDR and NF-κB binding that is linked to immune phenotypes

por Singh, Prashant K., van den Berg, Patrick R., Long, Mark D., Vreugdenhil, Angie, Grieshober, Laurie, Ochs-Balcom, Heather M., Wang, Jianmin, Delcambre, Sylvie, Heikkinen, Sami, Carlberg, Carsten, Campbell, Moray J., Sucheston-Campbell, Lara E.
Publicado 2017

Mpox outbreak in the Netherlands, 2022: public health response, characteristics of the first 1,000 cases and protection of the first-generation smallpox vaccine

por van Ewijk, Catharina E, Miura, Fuminari, van Rijckevorsel, Gini, de Vries, Henry JC, Welkers, Matthijs RA, van den Berg, Oda E, Friesema, Ingrid HM, van den Berg, Patrick R, Dalhuisen, Thomas, Wallinga, Jacco, Brandwagt, Diederik, van Cleef, Brigitte AGL, Vennema, Harry, Voordouw, Bettie, Koopmans, Marion, van der Eijk, Annemiek A, Swaan, Corien M, te Wierik, Margreet JM, Leenstra, Tjalling, Op de Coul, Eline, Franz, Eelco, van Benthem, Birgit, Brandwagt, Diederik, van der Eijk, Annemiek A, Bos, Hanna, van Bokhoven-Rombouts, Colette, Bovée, Lian, Rovers, Chantal P, van Cleef, Brigitte, van Dam, Alje P, van Dael, Rik, van Dissel, Jaap, Ellerbroek, Pauline, van Ewijk, Catharina, Franz, Eelco, GeurtsvanKessel, Corine, van der Giessen, Joke, Götz, Hannelore, Häger, Josette, van den Hof, Susan, Hoornenborg, Elske, Hintaran, Putri, de Jonge, Jorgen, Joosten, Rosa, Koopmans, Marion, Kosterman, Kevin, Lange, Jente, Leenstra, Tjalling, Meeske, André J, Mollema, Liesbeth, Op de Coul, Eline, Reurings, Demi, van Rijckevorsel, Gini, Ruijs, Helma, Swaan, Corien M, Smid, Linda, Sips, Gregorius J, de Stoppelaar, Sacha F, Vollaard, Albert, Voordouw, Bettie, Vennema, Harry, de Vries, Henry JC, Veldkamp, Karin Ellen, Weijdema, Klaartje, Westerhuis, Geert, te Wierik, Margreet JM, Welkers, Matthijs, Waegemaekers, Toos, Wallinga, Jacco, Zantkuijl, Paul
Publicado 2023