The human gut resistome

por van Schaik, Willem
Publicado 2015

Harder, better, faster, stronger: Colistin resistance mechanisms in Escherichia coli

por Janssen, Axel B., van Schaik, Willem
Publicado 2021

On the (im)possibility of reconstructing plasmids from whole-genome short-read sequencing data

por Arredondo-Alonso, Sergio, Willems, Rob J., van Schaik, Willem, Schürch, Anita C.
Publicado 2017

Temperature-Regulated IncX3 Plasmid Characteristics and the Role of Plasmid-Encoded H-NS in Thermoregulation

por Baomo, Liu, Lili, Shui, Moran, Robert A., van Schaik, Willem, Chao, Zhuo
Publicado 2022

Gauge your phage: benchmarking of bacteriophage identification tools in metagenomic sequencing data

por Ho, Siu Fung Stanley, Wheeler, Nicole E., Millard, Andrew D., van Schaik, Willem
Publicado 2023

IS element IS16 as a molecular screening tool to identify hospital-associated strains of Enterococcus faecium

por Werner, Guido, Fleige, Carola, Geringer, Uta, van Schaik, Willem, Klare, Ingo, Witte, Wolfgang
Publicado 2011

Recent Recombination Events in the Core Genome Are Associated with Adaptive Evolution in Enterococcus faecium

por de Been, Mark, van Schaik, Willem, Cheng, Lu, Corander, Jukka, Willems, Rob J.
Publicado 2013

Conditionally essential genes for survival during starvation in Enterococcus faecium E745

por de Maat, Vincent, Arredondo-Alonso, Sergio, Willems, Rob J. L., van Schaik, Willem
Publicado 2020

Cointegration as a mechanism for the evolution of a KPC-producing multidrug resistance plasmid in Proteus mirabilis

por Hua, Xiaoting, Zhang, Linyue, Moran, Robert A., Xu, Qingye, Sun, Long, van Schaik, Willem, Yu, Yunsong
Publicado 2020

Functional genomic analysis of bile salt resistance in Enterococcus faecium

por Zhang, Xinglin, Bierschenk, Damien, Top, Janetta, Anastasiou, Iacovos, Bonten, Marc JM, Willems, Rob JL, van Schaik, Willem
Publicado 2013

A LacI-Family Regulator Activates Maltodextrin Metabolism of Enterococcus faecium

por Zhang, Xinglin, Rogers, Malbert, Bierschenk, Damien, Bonten, Marc J. M., Willems, Rob J. L., van Schaik, Willem
Publicado 2013

Growth in a biofilm promotes conjugation of a bla(NDM-1)-bearing plasmid between Klebsiella pneumoniae strains

por Element, Sarah J., Moran, Robert A., Beattie, Emilie, Hall, Rebecca J., van Schaik, Willem, Buckner, Michelle M.C.
Publicado 2023

Enterococcus faecium genome dynamics during long-term asymptomatic patient gut colonization

por Bayjanov, Jumamurat R., Baan, Jery, Rogers, Malbert R. C., Troelstra, Annet, Willems, Rob J. L., van Schaik, Willem
Publicado 2019

Noise reduction strategies in metagenomic chromosome confirmation capture to link antibiotic resistance genes to microbial hosts

por McCallum, Gregory E., Rossiter, Amanda E., Quraishi, Mohammed Nabil, Iqbal, Tariq H., Kuehne, Sarah A., van Schaik, Willem
Publicado 2023

Rapid resistome mapping using nanopore sequencing

por van der Helm, Eric, Imamovic, Lejla, Hashim Ellabaan, Mostafa M., van Schaik, Willem, Koza, Anna, Sommer, Morten O.A.
Publicado 2017

Extended-Spectrum β-Lactamase Genes Traverse the Escherichia coli Populations of Intensive Care Unit Patients, Staff, and Environment

por Moran, Robert A., Baomo, Liu, Doughty, Emma L., Guo, Yingyi, Ba, Xiaoliang, van Schaik, Willem, Zhuo, Chao, McNally, Alan
Publicado 2023

Genome-Wide Identification of Ampicillin Resistance Determinants in Enterococcus faecium

por Zhang, Xinglin, Paganelli, Fernanda L., Bierschenk, Damien, Kuipers, Annemarie, Bonten, Marc J. M., Willems, Rob J. L., van Schaik, Willem
Publicado 2012

Restricted Gene Flow among Hospital Subpopulations of Enterococcus faecium

por Willems, Rob J. L., Top, Janetta, van Schaik, Willem, Leavis, Helen, Bonten, Marc, Sirén, Jukka, Hanage, William P., Corander, Jukka
Publicado 2012

Phenotypic and Genotypic Characterization of a Hypervirulent Carbapenem-Resistant Klebsiella pneumoniae ST17-KL38 Clinical Isolate Harboring the Carbapenemase IMP-4

por He, Jintao, Du, Xiaoxing, Zeng, Xi, Moran, Robert A., van Schaik, Willem, Zou, Quanming, Yu, Yunsong, Zhang, Jinyong, Hua, Xiaoting
Publicado 2022

CRISPR-Cas9-mediated genome editing in vancomycin-resistant Enterococcus faecium

por de Maat, Vincent, Stege, Paul B, Dedden, Mark, Hamer, Maud, van Pijkeren, Jan-Peter, Willems, Rob J L, van Schaik, Willem
Publicado 2020