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Bridging Scales: a Hybrid Model to Simulate Vascular Tumor Growth and Treatment Response

Cancer is a disease driven by random DNA mutations and the interaction of many complex phenomena. To improve the understanding and ultimately find more effective treatments, researchers leverage computer simulations mimicking the tumor growth in silico. The challenge here is to account for the many...

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Detalles Bibliográficos
Autores principales: Duswald, Tobias, Lima, Ernesto A.B.F., Oden, J. Tinsley, Wohlmuth, Barbara
Lenguaje:eng
Publicado: 2023
Materias:
Acceso en línea:http://cds.cern.ch/record/2862103
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author Duswald, Tobias
Lima, Ernesto A.B.F.
Oden, J. Tinsley
Wohlmuth, Barbara
author_facet Duswald, Tobias
Lima, Ernesto A.B.F.
Oden, J. Tinsley
Wohlmuth, Barbara
author_sort Duswald, Tobias
collection CERN
description Cancer is a disease driven by random DNA mutations and the interaction of many complex phenomena. To improve the understanding and ultimately find more effective treatments, researchers leverage computer simulations mimicking the tumor growth in silico. The challenge here is to account for the many phenomena influencing the disease progression and treatment protocols. This work introduces a computational model to simulate vascular tumor growth and the response to drug treatments in 3D. It consists of two agent-based models for the tumor cells and the vasculature. Moreover, partial differential equations govern the diffusive dynamics of the nutrients, the vascular endothelial growth factor, and two cancer drugs. The model focuses explicitly on breast cancer cells over-expressing HER2 receptors and a treatment combining standard chemotherapy (Doxorubicin) and monoclonal antibodies with anti-angiogenic properties (Trastuzumab). However, large parts of the model generalize to other scenarios. We show that the model qualitatively captures the effects of the combination therapy by comparing our simulation results with previously published pre-clinical data. Furthermore, we demonstrate the scalability of the model and the associated C++ code by simulating a vascular tumor occupying a volume of 400mm3 using a total of 92.5 million agents.
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institution Organización Europea para la Investigación Nuclear
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spelling cern-28621032023-07-11T15:22:06Zhttp://cds.cern.ch/record/2862103engDuswald, TobiasLima, Ernesto A.B.F.Oden, J. TinsleyWohlmuth, BarbaraBridging Scales: a Hybrid Model to Simulate Vascular Tumor Growth and Treatment Responsephysics.bio-phOther Fields of Physicsphysics.comp-phOther Fields of PhysicsCancer is a disease driven by random DNA mutations and the interaction of many complex phenomena. To improve the understanding and ultimately find more effective treatments, researchers leverage computer simulations mimicking the tumor growth in silico. The challenge here is to account for the many phenomena influencing the disease progression and treatment protocols. This work introduces a computational model to simulate vascular tumor growth and the response to drug treatments in 3D. It consists of two agent-based models for the tumor cells and the vasculature. Moreover, partial differential equations govern the diffusive dynamics of the nutrients, the vascular endothelial growth factor, and two cancer drugs. The model focuses explicitly on breast cancer cells over-expressing HER2 receptors and a treatment combining standard chemotherapy (Doxorubicin) and monoclonal antibodies with anti-angiogenic properties (Trastuzumab). However, large parts of the model generalize to other scenarios. We show that the model qualitatively captures the effects of the combination therapy by comparing our simulation results with previously published pre-clinical data. Furthermore, we demonstrate the scalability of the model and the associated C++ code by simulating a vascular tumor occupying a volume of 400mm3 using a total of 92.5 million agents.arXiv:2306.05994oai:cds.cern.ch:28621032023-06-09
spellingShingle physics.bio-ph
Other Fields of Physics
physics.comp-ph
Other Fields of Physics
Duswald, Tobias
Lima, Ernesto A.B.F.
Oden, J. Tinsley
Wohlmuth, Barbara
Bridging Scales: a Hybrid Model to Simulate Vascular Tumor Growth and Treatment Response
title Bridging Scales: a Hybrid Model to Simulate Vascular Tumor Growth and Treatment Response
title_full Bridging Scales: a Hybrid Model to Simulate Vascular Tumor Growth and Treatment Response
title_fullStr Bridging Scales: a Hybrid Model to Simulate Vascular Tumor Growth and Treatment Response
title_full_unstemmed Bridging Scales: a Hybrid Model to Simulate Vascular Tumor Growth and Treatment Response
title_short Bridging Scales: a Hybrid Model to Simulate Vascular Tumor Growth and Treatment Response
title_sort bridging scales: a hybrid model to simulate vascular tumor growth and treatment response
topic physics.bio-ph
Other Fields of Physics
physics.comp-ph
Other Fields of Physics
url http://cds.cern.ch/record/2862103
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AT odenjtinsley bridgingscalesahybridmodeltosimulatevasculartumorgrowthandtreatmentresponse
AT wohlmuthbarbara bridgingscalesahybridmodeltosimulatevasculartumorgrowthandtreatmentresponse