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Identification of gene mutations in six Chinese patients with maple syrup urine disease
Background: Maple syrup urine disease (MSUD) is a rare autosomal recessive amino acid metabolic disease. This study is to identify the pathogenic genetic factors of six cases of MUSD and evaluates the application value of high-throughput sequencing technology in the early diagnosis of MUSD. Methods:...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10001893/ https://www.ncbi.nlm.nih.gov/pubmed/36911408 http://dx.doi.org/10.3389/fgene.2023.1132364 |
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author | Li, Lulu Mao, Xinmei Yang, Nan Ji, Taoyun Wang, Shunan Ma, Yulan Yang, Haihe Sang, Yuting Zhao, Jinqi Gong, Lifei Tang, Yue Kong, Yuanyuan |
author_facet | Li, Lulu Mao, Xinmei Yang, Nan Ji, Taoyun Wang, Shunan Ma, Yulan Yang, Haihe Sang, Yuting Zhao, Jinqi Gong, Lifei Tang, Yue Kong, Yuanyuan |
author_sort | Li, Lulu |
collection | PubMed |
description | Background: Maple syrup urine disease (MSUD) is a rare autosomal recessive amino acid metabolic disease. This study is to identify the pathogenic genetic factors of six cases of MUSD and evaluates the application value of high-throughput sequencing technology in the early diagnosis of MUSD. Methods: Clinical examination was carried out for patients and used blood tandem mass spectrometry (MS/MS), urine gas chromatography-mass spectrometry (GC/MS), and the application of high-throughput sequencing technology for detection. Validate candidate mutations by polymerase chain reaction (PCR)—Sanger sequencing technology. Bioinformatics software analyzed the variants’ pathogenicity. Using Swiss PDB Viewer software to predict the effect of mutation on the structure of BCKDHA and BCKDHB proteins. Result: A total of six MSUD patients were diagnosed, including four males and two females. Nine variants were found in three genes of six MSUD families by high-throughput sequencing, including four missense mutations: c.659C>T(p.A220V), c.818C>T(p.T273I), c.1134C>G(p.D378E), and c.1006G>A(p.G336S); two non-sense mutations: c.1291C>T(p.R431*) and c.331C>T(p.R111*); three deletion mutations: c.550delT (p.S184Pfs*46), c.718delC (p.P240Lfs*14), and c.795delG (p.N266Tfs*64). Sanger sequencing’s results were consistent with the high-throughput sequencing. The bioinformatics software revealed that the mutations were harmful, and the prediction results of Swiss PDB Viewer suggest that variation affects protein conformation. Conclusion: This study identified nine pathogenic variants in the BCKDHA, BCKDHB, and DBT genes in six MSUD families, including two novel pathogenic variants in the BCKDHB gene, which enriched the genetic mutational spectrum of the disease. High-throughput sequencing is essential for the MSUD’s differential diagnosis, early treatment, and prenatal diagnosis. |
format | Online Article Text |
id | pubmed-10001893 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-100018932023-03-11 Identification of gene mutations in six Chinese patients with maple syrup urine disease Li, Lulu Mao, Xinmei Yang, Nan Ji, Taoyun Wang, Shunan Ma, Yulan Yang, Haihe Sang, Yuting Zhao, Jinqi Gong, Lifei Tang, Yue Kong, Yuanyuan Front Genet Genetics Background: Maple syrup urine disease (MSUD) is a rare autosomal recessive amino acid metabolic disease. This study is to identify the pathogenic genetic factors of six cases of MUSD and evaluates the application value of high-throughput sequencing technology in the early diagnosis of MUSD. Methods: Clinical examination was carried out for patients and used blood tandem mass spectrometry (MS/MS), urine gas chromatography-mass spectrometry (GC/MS), and the application of high-throughput sequencing technology for detection. Validate candidate mutations by polymerase chain reaction (PCR)—Sanger sequencing technology. Bioinformatics software analyzed the variants’ pathogenicity. Using Swiss PDB Viewer software to predict the effect of mutation on the structure of BCKDHA and BCKDHB proteins. Result: A total of six MSUD patients were diagnosed, including four males and two females. Nine variants were found in three genes of six MSUD families by high-throughput sequencing, including four missense mutations: c.659C>T(p.A220V), c.818C>T(p.T273I), c.1134C>G(p.D378E), and c.1006G>A(p.G336S); two non-sense mutations: c.1291C>T(p.R431*) and c.331C>T(p.R111*); three deletion mutations: c.550delT (p.S184Pfs*46), c.718delC (p.P240Lfs*14), and c.795delG (p.N266Tfs*64). Sanger sequencing’s results were consistent with the high-throughput sequencing. The bioinformatics software revealed that the mutations were harmful, and the prediction results of Swiss PDB Viewer suggest that variation affects protein conformation. Conclusion: This study identified nine pathogenic variants in the BCKDHA, BCKDHB, and DBT genes in six MSUD families, including two novel pathogenic variants in the BCKDHB gene, which enriched the genetic mutational spectrum of the disease. High-throughput sequencing is essential for the MSUD’s differential diagnosis, early treatment, and prenatal diagnosis. Frontiers Media S.A. 2023-02-24 /pmc/articles/PMC10001893/ /pubmed/36911408 http://dx.doi.org/10.3389/fgene.2023.1132364 Text en Copyright © 2023 Li, Mao, Yang, Ji, Wang, Ma, Yang, Sang, Zhao, Gong, Tang and Kong. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Li, Lulu Mao, Xinmei Yang, Nan Ji, Taoyun Wang, Shunan Ma, Yulan Yang, Haihe Sang, Yuting Zhao, Jinqi Gong, Lifei Tang, Yue Kong, Yuanyuan Identification of gene mutations in six Chinese patients with maple syrup urine disease |
title | Identification of gene mutations in six Chinese patients with maple syrup urine disease |
title_full | Identification of gene mutations in six Chinese patients with maple syrup urine disease |
title_fullStr | Identification of gene mutations in six Chinese patients with maple syrup urine disease |
title_full_unstemmed | Identification of gene mutations in six Chinese patients with maple syrup urine disease |
title_short | Identification of gene mutations in six Chinese patients with maple syrup urine disease |
title_sort | identification of gene mutations in six chinese patients with maple syrup urine disease |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10001893/ https://www.ncbi.nlm.nih.gov/pubmed/36911408 http://dx.doi.org/10.3389/fgene.2023.1132364 |
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