Cargando…
Oligo—Not Only for Silencing: Overlooked Potential for Multidirectional Action in Plants
Oligo technology is a low-cost and easy-to-implement method for direct manipulation of gene activity. The major advantage of this method is that gene expression can be changed without requiring stable transformation. Oligo technology is mainly used for animal cells. However, the use of oligos in pla...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10002457/ https://www.ncbi.nlm.nih.gov/pubmed/36901895 http://dx.doi.org/10.3390/ijms24054466 |
_version_ | 1784904394606641152 |
---|---|
author | Krasnodębski, Cezary Sawuła, Agnieszka Kaźmierczak, Urszula Żuk, Magdalena |
author_facet | Krasnodębski, Cezary Sawuła, Agnieszka Kaźmierczak, Urszula Żuk, Magdalena |
author_sort | Krasnodębski, Cezary |
collection | PubMed |
description | Oligo technology is a low-cost and easy-to-implement method for direct manipulation of gene activity. The major advantage of this method is that gene expression can be changed without requiring stable transformation. Oligo technology is mainly used for animal cells. However, the use of oligos in plants seems to be even easier. The oligo effect could be similar to that induced by endogenous miRNAs. In general, the action of exogenously introduced nucleic acids (Oligo) can be divided into a direct interaction with nucleic acids (genomic DNA, hnRNA, transcript) and an indirect interaction via the induction of processes regulating gene expression (at the transcriptional and translational levels) involving regulatory proteins using endogenous cellular mechanisms. Presumed mechanisms of oligonucleotides’ action in plant cells (including differences from animal cells) are described in this review. Basic principles of oligo action in plants that allow bidirectional changes in gene activity and even those that lead to heritable epigenetic changes in gene expression are presented. The effect of oligos is related to the target sequence at which they are directed. This paper also compares different delivery methods and provides a quick guide to using IT tools to help design oligonucleotides. |
format | Online Article Text |
id | pubmed-10002457 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-100024572023-03-11 Oligo—Not Only for Silencing: Overlooked Potential for Multidirectional Action in Plants Krasnodębski, Cezary Sawuła, Agnieszka Kaźmierczak, Urszula Żuk, Magdalena Int J Mol Sci Review Oligo technology is a low-cost and easy-to-implement method for direct manipulation of gene activity. The major advantage of this method is that gene expression can be changed without requiring stable transformation. Oligo technology is mainly used for animal cells. However, the use of oligos in plants seems to be even easier. The oligo effect could be similar to that induced by endogenous miRNAs. In general, the action of exogenously introduced nucleic acids (Oligo) can be divided into a direct interaction with nucleic acids (genomic DNA, hnRNA, transcript) and an indirect interaction via the induction of processes regulating gene expression (at the transcriptional and translational levels) involving regulatory proteins using endogenous cellular mechanisms. Presumed mechanisms of oligonucleotides’ action in plant cells (including differences from animal cells) are described in this review. Basic principles of oligo action in plants that allow bidirectional changes in gene activity and even those that lead to heritable epigenetic changes in gene expression are presented. The effect of oligos is related to the target sequence at which they are directed. This paper also compares different delivery methods and provides a quick guide to using IT tools to help design oligonucleotides. MDPI 2023-02-24 /pmc/articles/PMC10002457/ /pubmed/36901895 http://dx.doi.org/10.3390/ijms24054466 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Review Krasnodębski, Cezary Sawuła, Agnieszka Kaźmierczak, Urszula Żuk, Magdalena Oligo—Not Only for Silencing: Overlooked Potential for Multidirectional Action in Plants |
title | Oligo—Not Only for Silencing: Overlooked Potential for Multidirectional Action in Plants |
title_full | Oligo—Not Only for Silencing: Overlooked Potential for Multidirectional Action in Plants |
title_fullStr | Oligo—Not Only for Silencing: Overlooked Potential for Multidirectional Action in Plants |
title_full_unstemmed | Oligo—Not Only for Silencing: Overlooked Potential for Multidirectional Action in Plants |
title_short | Oligo—Not Only for Silencing: Overlooked Potential for Multidirectional Action in Plants |
title_sort | oligo—not only for silencing: overlooked potential for multidirectional action in plants |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10002457/ https://www.ncbi.nlm.nih.gov/pubmed/36901895 http://dx.doi.org/10.3390/ijms24054466 |
work_keys_str_mv | AT krasnodebskicezary oligonotonlyforsilencingoverlookedpotentialformultidirectionalactioninplants AT sawułaagnieszka oligonotonlyforsilencingoverlookedpotentialformultidirectionalactioninplants AT kazmierczakurszula oligonotonlyforsilencingoverlookedpotentialformultidirectionalactioninplants AT zukmagdalena oligonotonlyforsilencingoverlookedpotentialformultidirectionalactioninplants |