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Genome-Wide Landscape of mRNAs, lncRNAs, and circRNAs during Testicular Development of Yak

Testicular development is a tightly regulated process in mammals. Understanding the molecular mechanisms of yak testicular development will benefit the yak breeding industry. However, the roles of different RNAs, such as mRNA, lncRNA, and circRNA in the testicular development of yak, are still large...

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Autores principales: La, Yongfu, Ma, Xiaoming, Bao, Pengjia, Chu, Min, Yan, Ping, Liang, Chunnian, Guo, Xian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10002557/
https://www.ncbi.nlm.nih.gov/pubmed/36901865
http://dx.doi.org/10.3390/ijms24054420
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author La, Yongfu
Ma, Xiaoming
Bao, Pengjia
Chu, Min
Yan, Ping
Liang, Chunnian
Guo, Xian
author_facet La, Yongfu
Ma, Xiaoming
Bao, Pengjia
Chu, Min
Yan, Ping
Liang, Chunnian
Guo, Xian
author_sort La, Yongfu
collection PubMed
description Testicular development is a tightly regulated process in mammals. Understanding the molecular mechanisms of yak testicular development will benefit the yak breeding industry. However, the roles of different RNAs, such as mRNA, lncRNA, and circRNA in the testicular development of yak, are still largely unclear. In this study, transcriptome analyses were performed on the expression profiles of mRNAs, lncRNAs, and circRNAs in testis tissues of Ashidan yak at different developmental stages, including 6-months-old (M6), 18-months-old (M18), and 30-months-old (M30). A total of 30, 23, and 277 common differentially expressed (DE) mRNAs, lncRNAs, and circRNAs were identified in M6, M18, and M30, respectively. Furthermore, functional enrichment analysis showed that the common DE mRNAs during the entire developmental process were mainly involved in gonadal mesoderm development, cell differentiation, and spermatogenesis processes. Additionally, co-expression network analysis identified the potential lncRNAs related to spermatogenesis, e.g., TCONS_00087394 and TCONS_00012202. Our study provides new information about changes in RNA expression during yak testicular development, which greatly improves our understanding of the molecular mechanisms regulating testicular development in yaks.
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spelling pubmed-100025572023-03-11 Genome-Wide Landscape of mRNAs, lncRNAs, and circRNAs during Testicular Development of Yak La, Yongfu Ma, Xiaoming Bao, Pengjia Chu, Min Yan, Ping Liang, Chunnian Guo, Xian Int J Mol Sci Article Testicular development is a tightly regulated process in mammals. Understanding the molecular mechanisms of yak testicular development will benefit the yak breeding industry. However, the roles of different RNAs, such as mRNA, lncRNA, and circRNA in the testicular development of yak, are still largely unclear. In this study, transcriptome analyses were performed on the expression profiles of mRNAs, lncRNAs, and circRNAs in testis tissues of Ashidan yak at different developmental stages, including 6-months-old (M6), 18-months-old (M18), and 30-months-old (M30). A total of 30, 23, and 277 common differentially expressed (DE) mRNAs, lncRNAs, and circRNAs were identified in M6, M18, and M30, respectively. Furthermore, functional enrichment analysis showed that the common DE mRNAs during the entire developmental process were mainly involved in gonadal mesoderm development, cell differentiation, and spermatogenesis processes. Additionally, co-expression network analysis identified the potential lncRNAs related to spermatogenesis, e.g., TCONS_00087394 and TCONS_00012202. Our study provides new information about changes in RNA expression during yak testicular development, which greatly improves our understanding of the molecular mechanisms regulating testicular development in yaks. MDPI 2023-02-23 /pmc/articles/PMC10002557/ /pubmed/36901865 http://dx.doi.org/10.3390/ijms24054420 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
La, Yongfu
Ma, Xiaoming
Bao, Pengjia
Chu, Min
Yan, Ping
Liang, Chunnian
Guo, Xian
Genome-Wide Landscape of mRNAs, lncRNAs, and circRNAs during Testicular Development of Yak
title Genome-Wide Landscape of mRNAs, lncRNAs, and circRNAs during Testicular Development of Yak
title_full Genome-Wide Landscape of mRNAs, lncRNAs, and circRNAs during Testicular Development of Yak
title_fullStr Genome-Wide Landscape of mRNAs, lncRNAs, and circRNAs during Testicular Development of Yak
title_full_unstemmed Genome-Wide Landscape of mRNAs, lncRNAs, and circRNAs during Testicular Development of Yak
title_short Genome-Wide Landscape of mRNAs, lncRNAs, and circRNAs during Testicular Development of Yak
title_sort genome-wide landscape of mrnas, lncrnas, and circrnas during testicular development of yak
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10002557/
https://www.ncbi.nlm.nih.gov/pubmed/36901865
http://dx.doi.org/10.3390/ijms24054420
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