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REPRODUCIBLE AND CLINICALLY TRANSLATABLE DEEP NEURAL NETWORKS FOR CANCER SCREENING

Cervical cancer is a leading cause of cancer mortality, with approximately 90% of the 250,000 deaths per year occurring in low- and middle-income countries (LMIC). Secondary prevention with cervical screening involves detecting and treating precursor lesions; however, scaling screening efforts in LM...

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Autores principales: Ahmed, Syed Rakin, Befano, Brian, Lemay, Andreanne, Egemen, Didem, Rodriguez, Ana Cecilia, Angara, Sandeep, Desai, Kanan, Jeronimo, Jose, Antani, Sameer, Campos, Nicole, Inturrisi, Federica, Perkins, Rebecca, Kreimer, Aimee, Wentzensen, Nicolas, Herrero, Rolando, del Pino, Marta, Quint, Wim, de Sanjose, Silvia, Schiffman, Mark, Kalpathy-Cramer, Jayashree
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Journal Experts 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10002800/
https://www.ncbi.nlm.nih.gov/pubmed/36909463
http://dx.doi.org/10.21203/rs.3.rs-2526701/v1
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author Ahmed, Syed Rakin
Befano, Brian
Lemay, Andreanne
Egemen, Didem
Rodriguez, Ana Cecilia
Angara, Sandeep
Desai, Kanan
Jeronimo, Jose
Antani, Sameer
Campos, Nicole
Inturrisi, Federica
Perkins, Rebecca
Kreimer, Aimee
Wentzensen, Nicolas
Herrero, Rolando
del Pino, Marta
Quint, Wim
de Sanjose, Silvia
Schiffman, Mark
Kalpathy-Cramer, Jayashree
author_facet Ahmed, Syed Rakin
Befano, Brian
Lemay, Andreanne
Egemen, Didem
Rodriguez, Ana Cecilia
Angara, Sandeep
Desai, Kanan
Jeronimo, Jose
Antani, Sameer
Campos, Nicole
Inturrisi, Federica
Perkins, Rebecca
Kreimer, Aimee
Wentzensen, Nicolas
Herrero, Rolando
del Pino, Marta
Quint, Wim
de Sanjose, Silvia
Schiffman, Mark
Kalpathy-Cramer, Jayashree
author_sort Ahmed, Syed Rakin
collection PubMed
description Cervical cancer is a leading cause of cancer mortality, with approximately 90% of the 250,000 deaths per year occurring in low- and middle-income countries (LMIC). Secondary prevention with cervical screening involves detecting and treating precursor lesions; however, scaling screening efforts in LMIC has been hampered by infrastructure and cost constraints. Recent work has supported the development of an artificial intelligence (AI) pipeline on digital images of the cervix to achieve an accurate and reliable diagnosis of treatable precancerous lesions. In particular, WHO guidelines emphasize visual triage of women testing positive for human papillomavirus (HPV) as the primary screen, and AI could assist in this triage task. Published AI reports have exhibited overfitting, lack of portability, and unrealistic, near-perfect performance estimates. To surmount recognized issues, we implemented a comprehensive deep-learning model selection and optimization study on a large, collated, multi-institutional dataset of 9,462 women (17,013 images). We evaluated relative portability, repeatability, and classification performance. The top performing model, when combined with HPV type, achieved an area under the Receiver Operating Characteristics (ROC) curve (AUC) of 0.89 within our study population of interest, and a limited total extreme misclassification rate of 3.4%, on held-aside test sets. Our work is among the first efforts at designing a robust, repeatable, accurate and clinically translatable deep-learning model for cervical screening.
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spelling pubmed-100028002023-03-11 REPRODUCIBLE AND CLINICALLY TRANSLATABLE DEEP NEURAL NETWORKS FOR CANCER SCREENING Ahmed, Syed Rakin Befano, Brian Lemay, Andreanne Egemen, Didem Rodriguez, Ana Cecilia Angara, Sandeep Desai, Kanan Jeronimo, Jose Antani, Sameer Campos, Nicole Inturrisi, Federica Perkins, Rebecca Kreimer, Aimee Wentzensen, Nicolas Herrero, Rolando del Pino, Marta Quint, Wim de Sanjose, Silvia Schiffman, Mark Kalpathy-Cramer, Jayashree Res Sq Article Cervical cancer is a leading cause of cancer mortality, with approximately 90% of the 250,000 deaths per year occurring in low- and middle-income countries (LMIC). Secondary prevention with cervical screening involves detecting and treating precursor lesions; however, scaling screening efforts in LMIC has been hampered by infrastructure and cost constraints. Recent work has supported the development of an artificial intelligence (AI) pipeline on digital images of the cervix to achieve an accurate and reliable diagnosis of treatable precancerous lesions. In particular, WHO guidelines emphasize visual triage of women testing positive for human papillomavirus (HPV) as the primary screen, and AI could assist in this triage task. Published AI reports have exhibited overfitting, lack of portability, and unrealistic, near-perfect performance estimates. To surmount recognized issues, we implemented a comprehensive deep-learning model selection and optimization study on a large, collated, multi-institutional dataset of 9,462 women (17,013 images). We evaluated relative portability, repeatability, and classification performance. The top performing model, when combined with HPV type, achieved an area under the Receiver Operating Characteristics (ROC) curve (AUC) of 0.89 within our study population of interest, and a limited total extreme misclassification rate of 3.4%, on held-aside test sets. Our work is among the first efforts at designing a robust, repeatable, accurate and clinically translatable deep-learning model for cervical screening. American Journal Experts 2023-03-03 /pmc/articles/PMC10002800/ /pubmed/36909463 http://dx.doi.org/10.21203/rs.3.rs-2526701/v1 Text en https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0/) , which allows reusers to distribute, remix, adapt, and build upon the material in any medium or format, so long as attribution is given to the creator. The license allows for commercial use.
spellingShingle Article
Ahmed, Syed Rakin
Befano, Brian
Lemay, Andreanne
Egemen, Didem
Rodriguez, Ana Cecilia
Angara, Sandeep
Desai, Kanan
Jeronimo, Jose
Antani, Sameer
Campos, Nicole
Inturrisi, Federica
Perkins, Rebecca
Kreimer, Aimee
Wentzensen, Nicolas
Herrero, Rolando
del Pino, Marta
Quint, Wim
de Sanjose, Silvia
Schiffman, Mark
Kalpathy-Cramer, Jayashree
REPRODUCIBLE AND CLINICALLY TRANSLATABLE DEEP NEURAL NETWORKS FOR CANCER SCREENING
title REPRODUCIBLE AND CLINICALLY TRANSLATABLE DEEP NEURAL NETWORKS FOR CANCER SCREENING
title_full REPRODUCIBLE AND CLINICALLY TRANSLATABLE DEEP NEURAL NETWORKS FOR CANCER SCREENING
title_fullStr REPRODUCIBLE AND CLINICALLY TRANSLATABLE DEEP NEURAL NETWORKS FOR CANCER SCREENING
title_full_unstemmed REPRODUCIBLE AND CLINICALLY TRANSLATABLE DEEP NEURAL NETWORKS FOR CANCER SCREENING
title_short REPRODUCIBLE AND CLINICALLY TRANSLATABLE DEEP NEURAL NETWORKS FOR CANCER SCREENING
title_sort reproducible and clinically translatable deep neural networks for cancer screening
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10002800/
https://www.ncbi.nlm.nih.gov/pubmed/36909463
http://dx.doi.org/10.21203/rs.3.rs-2526701/v1
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