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The first genetic landscape of inherited retinal dystrophies in Portuguese patients identifies recurrent homozygous mutations as a frequent cause of pathogenesis

Inherited retinal diseases (IRDs) are a group of ocular conditions characterized by an elevated genetic and clinical heterogeneity. They are transmitted almost invariantly as monogenic traits. However, with more than 280 disease genes identified so far, association of clinical phenotypes with genoty...

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Autores principales: Peter, Virginie G, Kaminska, Karolina, Santos, Cristina, Quinodoz, Mathieu, Cancellieri, Francesca, Cisarova, Katarina, Pescini Gobert, Rosanna, Rodrigues, Raquel, Custódio, Sónia, Paris, Liliana P, Sousa, Ana Berta, Coutinho Santos, Luisa, Rivolta, Carlo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10003751/
https://www.ncbi.nlm.nih.gov/pubmed/36909829
http://dx.doi.org/10.1093/pnasnexus/pgad043
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author Peter, Virginie G
Kaminska, Karolina
Santos, Cristina
Quinodoz, Mathieu
Cancellieri, Francesca
Cisarova, Katarina
Pescini Gobert, Rosanna
Rodrigues, Raquel
Custódio, Sónia
Paris, Liliana P
Sousa, Ana Berta
Coutinho Santos, Luisa
Rivolta, Carlo
author_facet Peter, Virginie G
Kaminska, Karolina
Santos, Cristina
Quinodoz, Mathieu
Cancellieri, Francesca
Cisarova, Katarina
Pescini Gobert, Rosanna
Rodrigues, Raquel
Custódio, Sónia
Paris, Liliana P
Sousa, Ana Berta
Coutinho Santos, Luisa
Rivolta, Carlo
author_sort Peter, Virginie G
collection PubMed
description Inherited retinal diseases (IRDs) are a group of ocular conditions characterized by an elevated genetic and clinical heterogeneity. They are transmitted almost invariantly as monogenic traits. However, with more than 280 disease genes identified so far, association of clinical phenotypes with genotypes can be very challenging, and molecular diagnosis is essential for genetic counseling and correct management of the disease. In addition, the prevalence and the assortment of IRD mutations are often population-specific. In this work, we examined 230 families from Portugal, with individuals suffering from a variety of IRD diagnostic classes (270 subjects in total). Overall, we identified 157 unique mutations (34 previously unreported) in 57 distinct genes, with a diagnostic rate of 76%. The IRD mutational landscape was, to some extent, different from those reported in other European populations, including Spanish cohorts. For instance, the EYS gene appeared to be the most frequently mutated, with a prevalence of 10% among all IRD cases. This was, in part, due to the presence of a recurrent and seemingly founder mutation involving the deletion of exons 13 and 14 of this gene. Moreover, our analysis highlighted that as many as 51% of our cases had mutations in a homozygous state. To our knowledge, this is the first study assessing a cross-sectional genotype–phenotype landscape of IRDs in Portugal. Our data reveal a rather unique distribution of mutations, possibly shaped by a small number of rare ancestral events that have now become prevalent alleles in patients.
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spelling pubmed-100037512023-03-11 The first genetic landscape of inherited retinal dystrophies in Portuguese patients identifies recurrent homozygous mutations as a frequent cause of pathogenesis Peter, Virginie G Kaminska, Karolina Santos, Cristina Quinodoz, Mathieu Cancellieri, Francesca Cisarova, Katarina Pescini Gobert, Rosanna Rodrigues, Raquel Custódio, Sónia Paris, Liliana P Sousa, Ana Berta Coutinho Santos, Luisa Rivolta, Carlo PNAS Nexus Biological, Health, and Medical Sciences Inherited retinal diseases (IRDs) are a group of ocular conditions characterized by an elevated genetic and clinical heterogeneity. They are transmitted almost invariantly as monogenic traits. However, with more than 280 disease genes identified so far, association of clinical phenotypes with genotypes can be very challenging, and molecular diagnosis is essential for genetic counseling and correct management of the disease. In addition, the prevalence and the assortment of IRD mutations are often population-specific. In this work, we examined 230 families from Portugal, with individuals suffering from a variety of IRD diagnostic classes (270 subjects in total). Overall, we identified 157 unique mutations (34 previously unreported) in 57 distinct genes, with a diagnostic rate of 76%. The IRD mutational landscape was, to some extent, different from those reported in other European populations, including Spanish cohorts. For instance, the EYS gene appeared to be the most frequently mutated, with a prevalence of 10% among all IRD cases. This was, in part, due to the presence of a recurrent and seemingly founder mutation involving the deletion of exons 13 and 14 of this gene. Moreover, our analysis highlighted that as many as 51% of our cases had mutations in a homozygous state. To our knowledge, this is the first study assessing a cross-sectional genotype–phenotype landscape of IRDs in Portugal. Our data reveal a rather unique distribution of mutations, possibly shaped by a small number of rare ancestral events that have now become prevalent alleles in patients. Oxford University Press 2023-02-13 /pmc/articles/PMC10003751/ /pubmed/36909829 http://dx.doi.org/10.1093/pnasnexus/pgad043 Text en © The Author(s) 2023. Published by Oxford University Press on behalf of National Academy of Sciences. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Biological, Health, and Medical Sciences
Peter, Virginie G
Kaminska, Karolina
Santos, Cristina
Quinodoz, Mathieu
Cancellieri, Francesca
Cisarova, Katarina
Pescini Gobert, Rosanna
Rodrigues, Raquel
Custódio, Sónia
Paris, Liliana P
Sousa, Ana Berta
Coutinho Santos, Luisa
Rivolta, Carlo
The first genetic landscape of inherited retinal dystrophies in Portuguese patients identifies recurrent homozygous mutations as a frequent cause of pathogenesis
title The first genetic landscape of inherited retinal dystrophies in Portuguese patients identifies recurrent homozygous mutations as a frequent cause of pathogenesis
title_full The first genetic landscape of inherited retinal dystrophies in Portuguese patients identifies recurrent homozygous mutations as a frequent cause of pathogenesis
title_fullStr The first genetic landscape of inherited retinal dystrophies in Portuguese patients identifies recurrent homozygous mutations as a frequent cause of pathogenesis
title_full_unstemmed The first genetic landscape of inherited retinal dystrophies in Portuguese patients identifies recurrent homozygous mutations as a frequent cause of pathogenesis
title_short The first genetic landscape of inherited retinal dystrophies in Portuguese patients identifies recurrent homozygous mutations as a frequent cause of pathogenesis
title_sort first genetic landscape of inherited retinal dystrophies in portuguese patients identifies recurrent homozygous mutations as a frequent cause of pathogenesis
topic Biological, Health, and Medical Sciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10003751/
https://www.ncbi.nlm.nih.gov/pubmed/36909829
http://dx.doi.org/10.1093/pnasnexus/pgad043
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