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The shift of soil microbial community induced by cropping sequence affect soil properties and crop yield
Rational cropping maintains high soil fertility and a healthy ecosystem. Soil microorganism is the controller of soil fertility. Meanwhile, soil microbial communities also respond to different cropping patterns. The mechanisms by which biotic and abiotic factors were affected by different cropping s...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10004276/ https://www.ncbi.nlm.nih.gov/pubmed/36910216 http://dx.doi.org/10.3389/fmicb.2023.1095688 |
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author | Sun, Lei Wang, Shuang Narsing Rao, Manik Prabhu Shi, Yu Lian, Zheng-Han Jin, Pin-Jiao Wang, Wei Li, Yu-Mei Wang, Kang-Kang Banerjee, Aparna Cui, Xiao-Yang Wei, Dan |
author_facet | Sun, Lei Wang, Shuang Narsing Rao, Manik Prabhu Shi, Yu Lian, Zheng-Han Jin, Pin-Jiao Wang, Wei Li, Yu-Mei Wang, Kang-Kang Banerjee, Aparna Cui, Xiao-Yang Wei, Dan |
author_sort | Sun, Lei |
collection | PubMed |
description | Rational cropping maintains high soil fertility and a healthy ecosystem. Soil microorganism is the controller of soil fertility. Meanwhile, soil microbial communities also respond to different cropping patterns. The mechanisms by which biotic and abiotic factors were affected by different cropping sequences remain unclear in the major grain-producing regions of northeastern China. To evaluate the effects of different cropping sequences under conventional fertilization practices on soil properties, microbial communities, and crop yield, six types of plant cropping systems were performed, including soybean monoculture, wheat-soybean rotation, wheat-maize-soybean rotation, soybean-maize-maize rotation, maize-soybean-soybean rotation and maize monoculture. Our results showed that compared with the single cropping system, soybean and maize crop rotation in different combinations or sequences can increase soil total organic carbon and nutrients, and promote soybean and maize yield, especially using soybean-maize-maize and maize-soybean-soybean planting system. The 16S rRNA and internal transcribed spacer (ITS) amplicon sequencing showed that different cropping systems had different effects on bacterial and fungal communities. The bacterial and fungal communities of soybean monoculture were less diverse when compared to the other crop rotation planting system. Among the different cropping sequences, the number of observed bacterial species was greater in soybean-maize-maize planting setup and fungal species in maize-soybean-soybean planting setup. Some dominant and functional bacterial and fungal taxa in the rotation soils were observed. Network-based analysis suggests that bacterial phyla Acidobacteria and Actinobacteria while fungal phylum Ascomycota showed a positive correlation with other microbial communities. The phylogenetic investigation of communities by reconstruction of unobserved states (PICRUSt) result showed the presence of various metabolic pathways. Besides, the soybean-maize-maize significantly increased the proportion of some beneficial microorganisms in the soil and reduced the soil-borne animal and plant pathogens. These results warrant further investigation into the mechanisms driving responses of beneficial microbial communities and their capacity on improving soil fertility during legume cropping. The present study extends our understanding of how different crop rotations effect soil parameters, microbial diversity, and metabolic functions, and reveals the importance of crop rotation sequences. These findings could be used to guide decision-making from the microbial perspective for annual crop planting and soil management approaches. |
format | Online Article Text |
id | pubmed-10004276 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-100042762023-03-11 The shift of soil microbial community induced by cropping sequence affect soil properties and crop yield Sun, Lei Wang, Shuang Narsing Rao, Manik Prabhu Shi, Yu Lian, Zheng-Han Jin, Pin-Jiao Wang, Wei Li, Yu-Mei Wang, Kang-Kang Banerjee, Aparna Cui, Xiao-Yang Wei, Dan Front Microbiol Microbiology Rational cropping maintains high soil fertility and a healthy ecosystem. Soil microorganism is the controller of soil fertility. Meanwhile, soil microbial communities also respond to different cropping patterns. The mechanisms by which biotic and abiotic factors were affected by different cropping sequences remain unclear in the major grain-producing regions of northeastern China. To evaluate the effects of different cropping sequences under conventional fertilization practices on soil properties, microbial communities, and crop yield, six types of plant cropping systems were performed, including soybean monoculture, wheat-soybean rotation, wheat-maize-soybean rotation, soybean-maize-maize rotation, maize-soybean-soybean rotation and maize monoculture. Our results showed that compared with the single cropping system, soybean and maize crop rotation in different combinations or sequences can increase soil total organic carbon and nutrients, and promote soybean and maize yield, especially using soybean-maize-maize and maize-soybean-soybean planting system. The 16S rRNA and internal transcribed spacer (ITS) amplicon sequencing showed that different cropping systems had different effects on bacterial and fungal communities. The bacterial and fungal communities of soybean monoculture were less diverse when compared to the other crop rotation planting system. Among the different cropping sequences, the number of observed bacterial species was greater in soybean-maize-maize planting setup and fungal species in maize-soybean-soybean planting setup. Some dominant and functional bacterial and fungal taxa in the rotation soils were observed. Network-based analysis suggests that bacterial phyla Acidobacteria and Actinobacteria while fungal phylum Ascomycota showed a positive correlation with other microbial communities. The phylogenetic investigation of communities by reconstruction of unobserved states (PICRUSt) result showed the presence of various metabolic pathways. Besides, the soybean-maize-maize significantly increased the proportion of some beneficial microorganisms in the soil and reduced the soil-borne animal and plant pathogens. These results warrant further investigation into the mechanisms driving responses of beneficial microbial communities and their capacity on improving soil fertility during legume cropping. The present study extends our understanding of how different crop rotations effect soil parameters, microbial diversity, and metabolic functions, and reveals the importance of crop rotation sequences. These findings could be used to guide decision-making from the microbial perspective for annual crop planting and soil management approaches. Frontiers Media S.A. 2023-02-16 /pmc/articles/PMC10004276/ /pubmed/36910216 http://dx.doi.org/10.3389/fmicb.2023.1095688 Text en Copyright © 2023 Sun, Wang, Narsing Rao, Shi, Lian, Jin, Wang, Li, Wang, Banerjee, Cui and Wei. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Microbiology Sun, Lei Wang, Shuang Narsing Rao, Manik Prabhu Shi, Yu Lian, Zheng-Han Jin, Pin-Jiao Wang, Wei Li, Yu-Mei Wang, Kang-Kang Banerjee, Aparna Cui, Xiao-Yang Wei, Dan The shift of soil microbial community induced by cropping sequence affect soil properties and crop yield |
title | The shift of soil microbial community induced by cropping sequence affect soil properties and crop yield |
title_full | The shift of soil microbial community induced by cropping sequence affect soil properties and crop yield |
title_fullStr | The shift of soil microbial community induced by cropping sequence affect soil properties and crop yield |
title_full_unstemmed | The shift of soil microbial community induced by cropping sequence affect soil properties and crop yield |
title_short | The shift of soil microbial community induced by cropping sequence affect soil properties and crop yield |
title_sort | shift of soil microbial community induced by cropping sequence affect soil properties and crop yield |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10004276/ https://www.ncbi.nlm.nih.gov/pubmed/36910216 http://dx.doi.org/10.3389/fmicb.2023.1095688 |
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