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Identification of AREB/ABF Gene Family Involved in the Response of ABA under Salt and Drought Stresses in Jute (Corchorus olitorius L.)

The abscisic acid (ABA)-responsive element binding protein/ABRE-binding factor (AREB/ABF) subfamily members are essential to ABA signaling pathways and plant adaptation to various environmental stresses. Nevertheless, there are no reports on AREB/ABF in jute (Corchorus L.). Here, eight AREB/ABF gene...

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Autores principales: Fiallos-Salguero, Manuel Sebastian, Li, Jing, Li, Yunqing, Xu, Jiantang, Fang, Pingping, Wang, Yankun, Zhang, Liwu, Tao, Aifen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10005393/
https://www.ncbi.nlm.nih.gov/pubmed/36904020
http://dx.doi.org/10.3390/plants12051161
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author Fiallos-Salguero, Manuel Sebastian
Li, Jing
Li, Yunqing
Xu, Jiantang
Fang, Pingping
Wang, Yankun
Zhang, Liwu
Tao, Aifen
author_facet Fiallos-Salguero, Manuel Sebastian
Li, Jing
Li, Yunqing
Xu, Jiantang
Fang, Pingping
Wang, Yankun
Zhang, Liwu
Tao, Aifen
author_sort Fiallos-Salguero, Manuel Sebastian
collection PubMed
description The abscisic acid (ABA)-responsive element binding protein/ABRE-binding factor (AREB/ABF) subfamily members are essential to ABA signaling pathways and plant adaptation to various environmental stresses. Nevertheless, there are no reports on AREB/ABF in jute (Corchorus L.). Here, eight AREB/ABF genes were identified in the C. olitorius genome and classified into four groups (A–D) based on their phylogenetic relationships. A cis-elements analysis showed that CoABFs were widely involved in hormone response elements, followed by light and stress responses. Furthermore, the ABRE response element was involved in four CoABFs, playing an essential role in the ABA reaction. A genetic evolutionary analysis indicated that clear purification selection affects jute CoABFs and demonstrated that the divergence time was more ancient in cotton than in cacao. A quantitative real-time PCR revealed that the expression levels of CoABFs were upregulated and downregulated under ABA treatment, indicating that CoABF3 and CoABF7 are positively correlated with ABA concentration. Moreover, CoABF3 and CoABF7 were significantly upregulated in response to salt and drought stress, especially with the application of exogenous ABA, which showed higher intensities. These findings provide a complete analysis of the jute AREB/ABF gene family, which could be valuable for creating novel jute germplasms with a high resistance to abiotic stresses.
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spelling pubmed-100053932023-03-11 Identification of AREB/ABF Gene Family Involved in the Response of ABA under Salt and Drought Stresses in Jute (Corchorus olitorius L.) Fiallos-Salguero, Manuel Sebastian Li, Jing Li, Yunqing Xu, Jiantang Fang, Pingping Wang, Yankun Zhang, Liwu Tao, Aifen Plants (Basel) Article The abscisic acid (ABA)-responsive element binding protein/ABRE-binding factor (AREB/ABF) subfamily members are essential to ABA signaling pathways and plant adaptation to various environmental stresses. Nevertheless, there are no reports on AREB/ABF in jute (Corchorus L.). Here, eight AREB/ABF genes were identified in the C. olitorius genome and classified into four groups (A–D) based on their phylogenetic relationships. A cis-elements analysis showed that CoABFs were widely involved in hormone response elements, followed by light and stress responses. Furthermore, the ABRE response element was involved in four CoABFs, playing an essential role in the ABA reaction. A genetic evolutionary analysis indicated that clear purification selection affects jute CoABFs and demonstrated that the divergence time was more ancient in cotton than in cacao. A quantitative real-time PCR revealed that the expression levels of CoABFs were upregulated and downregulated under ABA treatment, indicating that CoABF3 and CoABF7 are positively correlated with ABA concentration. Moreover, CoABF3 and CoABF7 were significantly upregulated in response to salt and drought stress, especially with the application of exogenous ABA, which showed higher intensities. These findings provide a complete analysis of the jute AREB/ABF gene family, which could be valuable for creating novel jute germplasms with a high resistance to abiotic stresses. MDPI 2023-03-03 /pmc/articles/PMC10005393/ /pubmed/36904020 http://dx.doi.org/10.3390/plants12051161 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Fiallos-Salguero, Manuel Sebastian
Li, Jing
Li, Yunqing
Xu, Jiantang
Fang, Pingping
Wang, Yankun
Zhang, Liwu
Tao, Aifen
Identification of AREB/ABF Gene Family Involved in the Response of ABA under Salt and Drought Stresses in Jute (Corchorus olitorius L.)
title Identification of AREB/ABF Gene Family Involved in the Response of ABA under Salt and Drought Stresses in Jute (Corchorus olitorius L.)
title_full Identification of AREB/ABF Gene Family Involved in the Response of ABA under Salt and Drought Stresses in Jute (Corchorus olitorius L.)
title_fullStr Identification of AREB/ABF Gene Family Involved in the Response of ABA under Salt and Drought Stresses in Jute (Corchorus olitorius L.)
title_full_unstemmed Identification of AREB/ABF Gene Family Involved in the Response of ABA under Salt and Drought Stresses in Jute (Corchorus olitorius L.)
title_short Identification of AREB/ABF Gene Family Involved in the Response of ABA under Salt and Drought Stresses in Jute (Corchorus olitorius L.)
title_sort identification of areb/abf gene family involved in the response of aba under salt and drought stresses in jute (corchorus olitorius l.)
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10005393/
https://www.ncbi.nlm.nih.gov/pubmed/36904020
http://dx.doi.org/10.3390/plants12051161
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