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Preoperative (18)F-FDG PET/CT radiomics analysis for predicting HER2 expression and prognosis in gastric cancer

BACKGROUND: We aimed to establish and validate 2 machine learning models using (18)F-flurodeoxyglucose positron emission tomography/computed tomography ((18)F-FDG PET/CT) radiomic features to predict human epidermal growth factor receptor 2 (HER2) expression and prognosis in gastric cancer (GC) pati...

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Autores principales: Liu, Qiufang, Li, Jiaru, Xin, Bowen, Sun, Yuyun, Wang, Xiuying, Song, Shaoli
Formato: Online Artículo Texto
Lenguaje:English
Publicado: AME Publishing Company 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10006101/
https://www.ncbi.nlm.nih.gov/pubmed/36915308
http://dx.doi.org/10.21037/qims-22-148
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author Liu, Qiufang
Li, Jiaru
Xin, Bowen
Sun, Yuyun
Wang, Xiuying
Song, Shaoli
author_facet Liu, Qiufang
Li, Jiaru
Xin, Bowen
Sun, Yuyun
Wang, Xiuying
Song, Shaoli
author_sort Liu, Qiufang
collection PubMed
description BACKGROUND: We aimed to establish and validate 2 machine learning models using (18)F-flurodeoxyglucose positron emission tomography/computed tomography ((18)F-FDG PET/CT) radiomic features to predict human epidermal growth factor receptor 2 (HER2) expression and prognosis in gastric cancer (GC) patients. METHODS: We retrospectively enrolled 90 patients diagnosed with GC, including their clinical information and the (18)F-FDG PET/CT images. Patients were allocated to a training cohort of 72 patients and an independent validation cohort (IVC) of 18 patients. There were 2,100 radiomic features extracted from the (18)F-FDG PET/CT scans. A sequential combination of multivariate and univariate feature selection was applied, including sequential forward selection and a redundancy-based analysis. The justification of the model performance was conducted by cross-validation analysis on the training set and an independent validation analysis. RESULTS: The machine learning models were developed using a balanced bagging approach for HER2 expression prediction and prognosis prediction, which differentiated HER2 positive expression from negative expression in the IVC with an area under the receiver operating characteristic curve (AUC) of 0.72, sensitivity of 0.85, and specificity of 0.80. The IVC for prognosis prediction achieved an AUC of 0.75, sensitivity of 0.82, and specificity of 0.71. We also conducted a reasonable interpretation for the selected features in each classification task from multiple aspects, including normalized feature importance analysis and statistical correlation analysis with the clinical features that were defaulted to be effective. CONCLUSIONS: (18)F-FDG PET/CT radiomics analysis with a machine learning model provides a quantitative, efficient, and objective mechanism for predicting HER2 expression and prognosis in GC patients.
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spelling pubmed-100061012023-03-12 Preoperative (18)F-FDG PET/CT radiomics analysis for predicting HER2 expression and prognosis in gastric cancer Liu, Qiufang Li, Jiaru Xin, Bowen Sun, Yuyun Wang, Xiuying Song, Shaoli Quant Imaging Med Surg Original Article BACKGROUND: We aimed to establish and validate 2 machine learning models using (18)F-flurodeoxyglucose positron emission tomography/computed tomography ((18)F-FDG PET/CT) radiomic features to predict human epidermal growth factor receptor 2 (HER2) expression and prognosis in gastric cancer (GC) patients. METHODS: We retrospectively enrolled 90 patients diagnosed with GC, including their clinical information and the (18)F-FDG PET/CT images. Patients were allocated to a training cohort of 72 patients and an independent validation cohort (IVC) of 18 patients. There were 2,100 radiomic features extracted from the (18)F-FDG PET/CT scans. A sequential combination of multivariate and univariate feature selection was applied, including sequential forward selection and a redundancy-based analysis. The justification of the model performance was conducted by cross-validation analysis on the training set and an independent validation analysis. RESULTS: The machine learning models were developed using a balanced bagging approach for HER2 expression prediction and prognosis prediction, which differentiated HER2 positive expression from negative expression in the IVC with an area under the receiver operating characteristic curve (AUC) of 0.72, sensitivity of 0.85, and specificity of 0.80. The IVC for prognosis prediction achieved an AUC of 0.75, sensitivity of 0.82, and specificity of 0.71. We also conducted a reasonable interpretation for the selected features in each classification task from multiple aspects, including normalized feature importance analysis and statistical correlation analysis with the clinical features that were defaulted to be effective. CONCLUSIONS: (18)F-FDG PET/CT radiomics analysis with a machine learning model provides a quantitative, efficient, and objective mechanism for predicting HER2 expression and prognosis in GC patients. AME Publishing Company 2023-02-13 2023-03-01 /pmc/articles/PMC10006101/ /pubmed/36915308 http://dx.doi.org/10.21037/qims-22-148 Text en 2023 Quantitative Imaging in Medicine and Surgery. All rights reserved. https://creativecommons.org/licenses/by-nc-nd/4.0/Open Access Statement: This is an Open Access article distributed in accordance with the Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License (CC BY-NC-ND 4.0), which permits the non-commercial replication and distribution of the article with the strict proviso that no changes or edits are made and the original work is properly cited (including links to both the formal publication through the relevant DOI and the license). See: https://creativecommons.org/licenses/by-nc-nd/4.0 (https://creativecommons.org/licenses/by-nc-nd/4.0/) .
spellingShingle Original Article
Liu, Qiufang
Li, Jiaru
Xin, Bowen
Sun, Yuyun
Wang, Xiuying
Song, Shaoli
Preoperative (18)F-FDG PET/CT radiomics analysis for predicting HER2 expression and prognosis in gastric cancer
title Preoperative (18)F-FDG PET/CT radiomics analysis for predicting HER2 expression and prognosis in gastric cancer
title_full Preoperative (18)F-FDG PET/CT radiomics analysis for predicting HER2 expression and prognosis in gastric cancer
title_fullStr Preoperative (18)F-FDG PET/CT radiomics analysis for predicting HER2 expression and prognosis in gastric cancer
title_full_unstemmed Preoperative (18)F-FDG PET/CT radiomics analysis for predicting HER2 expression and prognosis in gastric cancer
title_short Preoperative (18)F-FDG PET/CT radiomics analysis for predicting HER2 expression and prognosis in gastric cancer
title_sort preoperative (18)f-fdg pet/ct radiomics analysis for predicting her2 expression and prognosis in gastric cancer
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10006101/
https://www.ncbi.nlm.nih.gov/pubmed/36915308
http://dx.doi.org/10.21037/qims-22-148
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