Cargando…

Transcriptome analysis and exploration of genes involved in the biosynthesis of secoiridoids in Gentiana rhodantha

Gentiana rhodantha is a medicinally important perennial herb used as traditional Chinese and ethnic medicines. Secoiridoids are one of the major bioactive compounds in G. rhodantha. To better understand the secoiridoid biosynthesis pathway, we generated transcriptome sequences from four organs (root...

Descripción completa

Detalles Bibliográficos
Autores principales:	Zhang, Ting, Wang, Miaomiao, Li, Zhaoju, Wu, Xien, Liu, Xiaoli
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	PeerJ Inc. 2023
Materias:	Bioinformatics
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10007974/ https://www.ncbi.nlm.nih.gov/pubmed/36915654 http://dx.doi.org/10.7717/peerj.14968

Ejemplares similares

Characterization of the complete chloroplast genome of Gentiana rhodantha (Gentianaceae)
por: Ling, Li-Zhen
Publicado: (2020)

Tissue culture and rapid propagation technology for Gentiana rhodantha
por: Han, Suju, et al.
Publicado: (2023)

Establishment of hairy root lines and analysis of iridoids and secoiridoids in the medicinal plant Gentiana scabra
por: Huang, Shih-Hung, et al.
Publicado: (2014)

Leaves of Yellow Gentian (Gentiana lutea) as an Alternative Source of Bitter Secoiridoid Glycosides
por: Fiorito, Serena, et al.
Publicado: (2022)

Comparative metabolic fingerprinting of Gentiana rhodantha from different geographical origins using LC-UV-MS/MS and multivariate statistical analysis
por: Pan, Yu, et al.
Publicado: (2015)

Comparative transcriptome analysis of roots, stems, and leaves of Pueraria lobata (Willd.) Ohwi: identification of genes involved in isoflavonoid biosynthesis
por: Wang, Chenkai, et al.
Publicado: (2021)

Deep sequencing and transcriptome analyses to identify genes involved in secoiridoid biosynthesis in the Tibetan medicinal plant Swertia mussotii
por: Liu, Yue, et al.
Publicado: (2017)

Metabolism and transcriptome profiling provides insight into the genes and transcription factors involved in monoterpene biosynthesis of borneol chemotype of Cinnamomum camphora induced by mechanical damage
por: Yang, Zerui, et al.
Publicado: (2021)

Transcriptome analysis of Chelidonium majus elaiosomes and seeds provide insights into fatty acid biosynthesis
por: Wu, Jiayue, et al.
Publicado: (2019)

Transcriptome and metabolome analyses of lignin biosynthesis mechanism of Platycladus orientalis
por: Li, Ying, et al.
Publicado: (2022)

De novo sequencing of Bletilla striata (Orchidaceae) transcriptome and identification of genes involved in polysaccharide biosynthesis
por: Niu, Junfeng, et al.
Publicado: (2020)

Comparative transcriptome analysis revealed genes involved in the fruiting body development of Ophiocordyceps sinensis
por: Tong, Xinxin, et al.
Publicado: (2020)

Bioinformatic analysis of key pathways and genes involved in pediatric atopic dermatitis
por: Wang, Tianyi, et al.
Publicado: (2021)

Gentiopicroside, a Secoiridoid Glycoside from Gentiana rigescens Franch, Extends the Lifespan of Yeast via Inducing Mitophagy and Antioxidative Stress
por: Liu, Qian, et al.
Publicado: (2020)

Investigation of a Medical Plant for Hepatic Diseases with Secoiridoids Using HPLC and FT-IR Spectroscopy for a Case of Gentiana rigescens
por: Yang, Yuangui, et al.
Publicado: (2020)

Transcriptome analysis of Polygonum minus reveals candidate genes involved in important secondary metabolic pathways of phenylpropanoids and flavonoids
por: Loke, Kok-Keong, et al.
Publicado: (2017)

Integrated transcriptome and metabolome analyses revealed regulatory mechanisms of flavonoid biosynthesis in Radix Ardisia
por: Liu, Chang, et al.
Publicado: (2022)

Pharmacokinetic Analysis of Four Bioactive Iridoid and Secoiridoid Glycoside Components of Radix Gentianae Macrophyllae and Their Synergistic Excretion by HPLC-DAD Combined with Second-Order Calibration
por: Yang, Tian-Ming, et al.
Publicado: (2017)

Identification, expression, and phylogenetic analyses of terpenoid biosynthesis-related genes in secondary xylem of loblolly pine (Pinus taeda L.) based on transcriptome analyses
por: Mao, Jipeng, et al.
Publicado: (2019)

Transcriptomic heterogeneity of driver gene mutations reveals novel mutual exclusivity and improves exploration of functional associations
por: Lan, Yujia, et al.
Publicado: (2021)

Exploring the biosynthetic pathway of lignin in Acorus tatarinowii Schott using de novo leaf and rhizome transcriptome analysis
por: Zhang, Shengxiang, et al.
Publicado: (2021)

Comparative transcriptomics and bioinformatics analysis of genes related to photosynthesis in Eucalyptus camaldulensis
por: Zhan, Ni, et al.
Publicado: (2022)

Transcriptome analysis reveals the mechanism of pyroptosis-related genes in septic cardiomyopathy
por: Zhu, Haoyan, et al.
Publicado: (2023)

Analysis of genes and underlying mechanisms involved in foam cells formation and atherosclerosis development
por: Zhang, Kai, et al.
Publicado: (2020)

Comparative transcriptomics analysis of contrasting varieties of Eucalyptus camaldulensis reveals wind resistance genes
por: Shang, Xiuhua, et al.
Publicado: (2022)

Comparative full-length transcriptome analysis by Oxford Nanopore Technologies reveals genes involved in anthocyanin accumulation in storage roots of sweet potatoes (Ipomoea batatas L.)
por: Xiong, Jun, et al.
Publicado: (2022)

Exploration of the involvement of LncRNA in HIV-associated encephalitis using bioinformatics
por: Li, Diangeng, et al.
Publicado: (2018)

De novo transcriptome assembly and characterization of nine tissues of Lonicera japonica to identify potential candidate genes involved in chlorogenic acid, luteolosides, and secoiridoid biosynthesis pathways
por: Rai, Amit, et al.
Publicado: (2016)

Transcriptome analysis revealed key prognostic genes and microRNAs in hepatocellular carcinoma
por: Ma, Xi, et al.
Publicado: (2020)

Blood transcriptome analysis revealing aging gene expression profiles in red panda
por: Luo, Jing, et al.
Publicado: (2022)

Transcriptomics analysis of Psidium cattleyanum Sabine (Myrtaceae) unveil potential genes involved in fruit pigmentation
por: Vetö, Nicole M., et al.
Publicado: (2020)

Butyryl/Caproyl-CoA:Acetate CoA-transferase: cloning, expression and characterization of the key enzyme involved in medium-chain fatty acid biosynthesis
por: Yang, Qingzhuoma, et al.
Publicado: (2021)

Flavonoid biosynthesis controls fiber color in naturally colored cotton
por: Liu, Hai-Feng, et al.
Publicado: (2018)

Prognostic impact of a lymphocyte activation-associated gene signature in GBM based on transcriptome analysis
por: Lan, Yujia, et al.
Publicado: (2021)

Key radioresistance regulation models and marker genes identified by integrated transcriptome analysis in nasopharyngeal carcinoma
por: Sun, Zhuang, et al.
Publicado: (2021)

Identification of significant gene and pathways involved in HBV-related hepatocellular carcinoma by bioinformatics analysis
por: Xie, Shucai, et al.
Publicado: (2019)

VIRdb: a comprehensive database for interactive analysis of genes/proteins involved in the pathogenesis of vitiligo
por: Srivastava, Priyansh, et al.
Publicado: (2020)

Exploring the potential biomarkers for prognosis of glioblastoma via weighted gene co-expression network analysis
por: Zhang, Mengyuan, et al.
Publicado: (2022)

Genome-wide comparison of genes involved in the biosynthesis, metabolism, and signaling of juvenile hormone between silkworm and other insects
por: Cheng, Daojun, et al.
Publicado: (2014)

Identification of Biomarker in Brain-specific Gene Regulatory Network Using Structural Controllability Analysis
por: Chen, Zhihua, et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_baajmbsbcmu83nq5ckn0k8d6lh