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An immune-related prognostic signature associated with immune landscape and therapeutic responses in gastric cancer

Immune-related genes (IRGs) have attracted attention in recent years as therapeutic targets in various tumors. However, the role of IRGs in gastric cancer (GC) has not been clearly elucidated. This study presents a comprehensive analysis exploring the clinical, molecular, immune, and drug response f...

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Autores principales: Sun, Jian-Rong, Kong, Chen-Fan, Qu, Xiang-Ke, Sun, An-Tao, Zhao, Kun-Peng, Sun, Jin-Hui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10008502/
https://www.ncbi.nlm.nih.gov/pubmed/36812479
http://dx.doi.org/10.18632/aging.204534
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author Sun, Jian-Rong
Kong, Chen-Fan
Qu, Xiang-Ke
Sun, An-Tao
Zhao, Kun-Peng
Sun, Jin-Hui
author_facet Sun, Jian-Rong
Kong, Chen-Fan
Qu, Xiang-Ke
Sun, An-Tao
Zhao, Kun-Peng
Sun, Jin-Hui
author_sort Sun, Jian-Rong
collection PubMed
description Immune-related genes (IRGs) have attracted attention in recent years as therapeutic targets in various tumors. However, the role of IRGs in gastric cancer (GC) has not been clearly elucidated. This study presents a comprehensive analysis exploring the clinical, molecular, immune, and drug response features characterizing the IRGs in GC. Data were acquired from the TCGA and GEO databases. The Cox regression analyses were performed to develop a prognostic risk signature. The genetic variants, immune infiltration, and drug responses associated with the risk signature were explored using bioinformatics methods. Lastly, the expression of the IRS was verified by qRT-PCR in cell lines. In this manner, an immune-related signature (IRS) was established based on 8 IRGs. According to the IRS, patients were divided into the low-risk group (LRG) and high-risk group (HRG). Compared with the HRG, the LRG was characterized by a better prognosis, high genomic instability, more CD8+ T cell infiltration, greater sensitivity to chemotherapeutic drugs, and greater likelihood of benefiting from the immunotherapy. Moreover, the expression result showed good consistency between the qRT-PCR and TCGA cohort. Our findings provide insights into the specific clinical and immune features underlying the IRS, which may be important for patient treatment.
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spelling pubmed-100085022023-03-13 An immune-related prognostic signature associated with immune landscape and therapeutic responses in gastric cancer Sun, Jian-Rong Kong, Chen-Fan Qu, Xiang-Ke Sun, An-Tao Zhao, Kun-Peng Sun, Jin-Hui Aging (Albany NY) Research Paper Immune-related genes (IRGs) have attracted attention in recent years as therapeutic targets in various tumors. However, the role of IRGs in gastric cancer (GC) has not been clearly elucidated. This study presents a comprehensive analysis exploring the clinical, molecular, immune, and drug response features characterizing the IRGs in GC. Data were acquired from the TCGA and GEO databases. The Cox regression analyses were performed to develop a prognostic risk signature. The genetic variants, immune infiltration, and drug responses associated with the risk signature were explored using bioinformatics methods. Lastly, the expression of the IRS was verified by qRT-PCR in cell lines. In this manner, an immune-related signature (IRS) was established based on 8 IRGs. According to the IRS, patients were divided into the low-risk group (LRG) and high-risk group (HRG). Compared with the HRG, the LRG was characterized by a better prognosis, high genomic instability, more CD8+ T cell infiltration, greater sensitivity to chemotherapeutic drugs, and greater likelihood of benefiting from the immunotherapy. Moreover, the expression result showed good consistency between the qRT-PCR and TCGA cohort. Our findings provide insights into the specific clinical and immune features underlying the IRS, which may be important for patient treatment. Impact Journals 2023-02-22 /pmc/articles/PMC10008502/ /pubmed/36812479 http://dx.doi.org/10.18632/aging.204534 Text en Copyright: © 2023 Sun et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Sun, Jian-Rong
Kong, Chen-Fan
Qu, Xiang-Ke
Sun, An-Tao
Zhao, Kun-Peng
Sun, Jin-Hui
An immune-related prognostic signature associated with immune landscape and therapeutic responses in gastric cancer
title An immune-related prognostic signature associated with immune landscape and therapeutic responses in gastric cancer
title_full An immune-related prognostic signature associated with immune landscape and therapeutic responses in gastric cancer
title_fullStr An immune-related prognostic signature associated with immune landscape and therapeutic responses in gastric cancer
title_full_unstemmed An immune-related prognostic signature associated with immune landscape and therapeutic responses in gastric cancer
title_short An immune-related prognostic signature associated with immune landscape and therapeutic responses in gastric cancer
title_sort immune-related prognostic signature associated with immune landscape and therapeutic responses in gastric cancer
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10008502/
https://www.ncbi.nlm.nih.gov/pubmed/36812479
http://dx.doi.org/10.18632/aging.204534
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