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Diagnosis of COVID-19 from X-rays using combined CNN-RNN architecture with transfer learning
Combating the COVID-19 pandemic has emerged as one of the most promising issues in global healthcare. Accurate and fast diagnosis of COVID-19 cases is required for the right medical treatment to control this pandemic. Chest radiography imaging techniques are more effective than the reverse-transcrip...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Authors. Publishing services by Elsevier B.V. on behalf of KeAi Communications Co. Ltd.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10010001/ http://dx.doi.org/10.1016/j.tbench.2023.100088 |
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author | Islam, Md. Milon Islam, Md. Zabirul Asraf, Amanullah Al-Rakhami, Mabrook S. Ding, Weiping Sodhro, Ali Hassan |
author_facet | Islam, Md. Milon Islam, Md. Zabirul Asraf, Amanullah Al-Rakhami, Mabrook S. Ding, Weiping Sodhro, Ali Hassan |
author_sort | Islam, Md. Milon |
collection | PubMed |
description | Combating the COVID-19 pandemic has emerged as one of the most promising issues in global healthcare. Accurate and fast diagnosis of COVID-19 cases is required for the right medical treatment to control this pandemic. Chest radiography imaging techniques are more effective than the reverse-transcription polymerase chain reaction (RT-PCR) method in detecting coronavirus. Due to the limited availability of medical images, transfer learning is better suited to classify patterns in medical images. This paper presents a combined architecture of convolutional neural network (CNN) and recurrent neural network (RNN) to diagnose COVID-19 patients from chest X-rays. The deep transfer techniques used in this experiment are VGG19, DenseNet121, InceptionV3, and Inception-ResNetV2, where CNN is used to extract complex features from samples and classify them using RNN. In our experiments, the VGG19-RNN architecture outperformed all other networks in terms of accuracy. Finally, decision-making regions of images were visualized using gradient-weighted class activation mapping (Grad-CAM). The system achieved promising results compared to other existing systems and might be validated in the future when more samples would be available. The experiment demonstrated a good alternative method to diagnose COVID-19 for medical staff. All the data used during the study are openly available from the Mendeley data repository at https://data.mendeley.com/datasets/mxc6vb7svm. For further research, we have made the source code publicly available at https://github.com/Asraf047/COVID19-CNN-RNN. |
format | Online Article Text |
id | pubmed-10010001 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | The Authors. Publishing services by Elsevier B.V. on behalf of KeAi Communications Co. Ltd. |
record_format | MEDLINE/PubMed |
spelling | pubmed-100100012023-03-14 Diagnosis of COVID-19 from X-rays using combined CNN-RNN architecture with transfer learning Islam, Md. Milon Islam, Md. Zabirul Asraf, Amanullah Al-Rakhami, Mabrook S. Ding, Weiping Sodhro, Ali Hassan BenchCouncil Transactions on Benchmarks, Standards and Evaluations Research Article Combating the COVID-19 pandemic has emerged as one of the most promising issues in global healthcare. Accurate and fast diagnosis of COVID-19 cases is required for the right medical treatment to control this pandemic. Chest radiography imaging techniques are more effective than the reverse-transcription polymerase chain reaction (RT-PCR) method in detecting coronavirus. Due to the limited availability of medical images, transfer learning is better suited to classify patterns in medical images. This paper presents a combined architecture of convolutional neural network (CNN) and recurrent neural network (RNN) to diagnose COVID-19 patients from chest X-rays. The deep transfer techniques used in this experiment are VGG19, DenseNet121, InceptionV3, and Inception-ResNetV2, where CNN is used to extract complex features from samples and classify them using RNN. In our experiments, the VGG19-RNN architecture outperformed all other networks in terms of accuracy. Finally, decision-making regions of images were visualized using gradient-weighted class activation mapping (Grad-CAM). The system achieved promising results compared to other existing systems and might be validated in the future when more samples would be available. The experiment demonstrated a good alternative method to diagnose COVID-19 for medical staff. All the data used during the study are openly available from the Mendeley data repository at https://data.mendeley.com/datasets/mxc6vb7svm. For further research, we have made the source code publicly available at https://github.com/Asraf047/COVID19-CNN-RNN. The Authors. Publishing services by Elsevier B.V. on behalf of KeAi Communications Co. Ltd. 2022-10 2023-03-13 /pmc/articles/PMC10010001/ http://dx.doi.org/10.1016/j.tbench.2023.100088 Text en © 2023 The Authors. Publishing services by Elsevier B.V. on behalf of KeAi Communications Co. Ltd. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active. |
spellingShingle | Research Article Islam, Md. Milon Islam, Md. Zabirul Asraf, Amanullah Al-Rakhami, Mabrook S. Ding, Weiping Sodhro, Ali Hassan Diagnosis of COVID-19 from X-rays using combined CNN-RNN architecture with transfer learning |
title | Diagnosis of COVID-19 from X-rays using combined CNN-RNN architecture with transfer learning |
title_full | Diagnosis of COVID-19 from X-rays using combined CNN-RNN architecture with transfer learning |
title_fullStr | Diagnosis of COVID-19 from X-rays using combined CNN-RNN architecture with transfer learning |
title_full_unstemmed | Diagnosis of COVID-19 from X-rays using combined CNN-RNN architecture with transfer learning |
title_short | Diagnosis of COVID-19 from X-rays using combined CNN-RNN architecture with transfer learning |
title_sort | diagnosis of covid-19 from x-rays using combined cnn-rnn architecture with transfer learning |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10010001/ http://dx.doi.org/10.1016/j.tbench.2023.100088 |
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