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Diagnosis of COVID-19 from X-rays using combined CNN-RNN architecture with transfer learning

Combating the COVID-19 pandemic has emerged as one of the most promising issues in global healthcare. Accurate and fast diagnosis of COVID-19 cases is required for the right medical treatment to control this pandemic. Chest radiography imaging techniques are more effective than the reverse-transcrip...

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Autores principales: Islam, Md. Milon, Islam, Md. Zabirul, Asraf, Amanullah, Al-Rakhami, Mabrook S., Ding, Weiping, Sodhro, Ali Hassan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Authors. Publishing services by Elsevier B.V. on behalf of KeAi Communications Co. Ltd. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10010001/
http://dx.doi.org/10.1016/j.tbench.2023.100088
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author Islam, Md. Milon
Islam, Md. Zabirul
Asraf, Amanullah
Al-Rakhami, Mabrook S.
Ding, Weiping
Sodhro, Ali Hassan
author_facet Islam, Md. Milon
Islam, Md. Zabirul
Asraf, Amanullah
Al-Rakhami, Mabrook S.
Ding, Weiping
Sodhro, Ali Hassan
author_sort Islam, Md. Milon
collection PubMed
description Combating the COVID-19 pandemic has emerged as one of the most promising issues in global healthcare. Accurate and fast diagnosis of COVID-19 cases is required for the right medical treatment to control this pandemic. Chest radiography imaging techniques are more effective than the reverse-transcription polymerase chain reaction (RT-PCR) method in detecting coronavirus. Due to the limited availability of medical images, transfer learning is better suited to classify patterns in medical images. This paper presents a combined architecture of convolutional neural network (CNN) and recurrent neural network (RNN) to diagnose COVID-19 patients from chest X-rays. The deep transfer techniques used in this experiment are VGG19, DenseNet121, InceptionV3, and Inception-ResNetV2, where CNN is used to extract complex features from samples and classify them using RNN. In our experiments, the VGG19-RNN architecture outperformed all other networks in terms of accuracy. Finally, decision-making regions of images were visualized using gradient-weighted class activation mapping (Grad-CAM). The system achieved promising results compared to other existing systems and might be validated in the future when more samples would be available. The experiment demonstrated a good alternative method to diagnose COVID-19 for medical staff. All the data used during the study are openly available from the Mendeley data repository at https://data.mendeley.com/datasets/mxc6vb7svm. For further research, we have made the source code publicly available at https://github.com/Asraf047/COVID19-CNN-RNN.
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spelling pubmed-100100012023-03-14 Diagnosis of COVID-19 from X-rays using combined CNN-RNN architecture with transfer learning Islam, Md. Milon Islam, Md. Zabirul Asraf, Amanullah Al-Rakhami, Mabrook S. Ding, Weiping Sodhro, Ali Hassan BenchCouncil Transactions on Benchmarks, Standards and Evaluations Research Article Combating the COVID-19 pandemic has emerged as one of the most promising issues in global healthcare. Accurate and fast diagnosis of COVID-19 cases is required for the right medical treatment to control this pandemic. Chest radiography imaging techniques are more effective than the reverse-transcription polymerase chain reaction (RT-PCR) method in detecting coronavirus. Due to the limited availability of medical images, transfer learning is better suited to classify patterns in medical images. This paper presents a combined architecture of convolutional neural network (CNN) and recurrent neural network (RNN) to diagnose COVID-19 patients from chest X-rays. The deep transfer techniques used in this experiment are VGG19, DenseNet121, InceptionV3, and Inception-ResNetV2, where CNN is used to extract complex features from samples and classify them using RNN. In our experiments, the VGG19-RNN architecture outperformed all other networks in terms of accuracy. Finally, decision-making regions of images were visualized using gradient-weighted class activation mapping (Grad-CAM). The system achieved promising results compared to other existing systems and might be validated in the future when more samples would be available. The experiment demonstrated a good alternative method to diagnose COVID-19 for medical staff. All the data used during the study are openly available from the Mendeley data repository at https://data.mendeley.com/datasets/mxc6vb7svm. For further research, we have made the source code publicly available at https://github.com/Asraf047/COVID19-CNN-RNN. The Authors. Publishing services by Elsevier B.V. on behalf of KeAi Communications Co. Ltd. 2022-10 2023-03-13 /pmc/articles/PMC10010001/ http://dx.doi.org/10.1016/j.tbench.2023.100088 Text en © 2023 The Authors. Publishing services by Elsevier B.V. on behalf of KeAi Communications Co. Ltd. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Research Article
Islam, Md. Milon
Islam, Md. Zabirul
Asraf, Amanullah
Al-Rakhami, Mabrook S.
Ding, Weiping
Sodhro, Ali Hassan
Diagnosis of COVID-19 from X-rays using combined CNN-RNN architecture with transfer learning
title Diagnosis of COVID-19 from X-rays using combined CNN-RNN architecture with transfer learning
title_full Diagnosis of COVID-19 from X-rays using combined CNN-RNN architecture with transfer learning
title_fullStr Diagnosis of COVID-19 from X-rays using combined CNN-RNN architecture with transfer learning
title_full_unstemmed Diagnosis of COVID-19 from X-rays using combined CNN-RNN architecture with transfer learning
title_short Diagnosis of COVID-19 from X-rays using combined CNN-RNN architecture with transfer learning
title_sort diagnosis of covid-19 from x-rays using combined cnn-rnn architecture with transfer learning
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10010001/
http://dx.doi.org/10.1016/j.tbench.2023.100088
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