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Integrating Network Pharmacology, Molecular Docking and Pharmacological Evaluation for Exploring the Polyrhachis vicina Rogers in Ameliorating Depression
PURPOSE: To investigate the mechanisms of antidepressant action of active fraction of Polyrhachis vicina Rogers (AFPR) through network pharmacology, molecular docking and experimental validation. METHODS: GC-MS was used to predict chemical compounds, corresponding databases were used to predict chem...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Dove
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10010188/ https://www.ncbi.nlm.nih.gov/pubmed/36923105 http://dx.doi.org/10.2147/DDDT.S399183 |
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author | He, Junhui Han, Dongbo Jia, Chunlian Xie, Jiaxiu Zhu, Fucui Wei, Jie Li, Dongmei Wei, Dongmei Li, Yi Tang, Li Wei, Guining Yan, Jing Tong, Yuanming Yang, Lifang Tan, Xuecai |
author_facet | He, Junhui Han, Dongbo Jia, Chunlian Xie, Jiaxiu Zhu, Fucui Wei, Jie Li, Dongmei Wei, Dongmei Li, Yi Tang, Li Wei, Guining Yan, Jing Tong, Yuanming Yang, Lifang Tan, Xuecai |
author_sort | He, Junhui |
collection | PubMed |
description | PURPOSE: To investigate the mechanisms of antidepressant action of active fraction of Polyrhachis vicina Rogers (AFPR) through network pharmacology, molecular docking and experimental validation. METHODS: GC-MS was used to predict chemical compounds, corresponding databases were used to predict chemical compound targets and depression targets, Cytoscape software was used to construct and analyze the protein interaction network map, DAVID database was used to analyze gene ontology (GO) and KEGG signaling pathway, and AGFR software was used to perform molecular docking. Subsequently, the underlying action mechanisms of AFPR on depression predicted by network pharmacology analyses were experimentally validated in a CORT-induced depression model in vitro and in vivo. RESULTS: A total of 52 potential targets of AFPR on antidepressant were obtained. GO is mainly related to chemical synaptic transmission, signal transduction and others. KEGG signaling pathways are mainly related to cAMP signaling pathway and C-type lectin receptor signaling pathway. The experiment results showed that AFPR significantly increased the expression of PRKACA, CREB and BDNF in mouse brain tissue and PC12 cells. Furthermore, after interfered of cAMP in PC12 cells, the decreased expression of PRKACA, CREB and BDNF was reversed by AFPR. CONCLUSION: AFPR may exert antidepressant effects through multiple components, targets and pathways. Furthermore, it could improve neuroplasticity via the cAMP signaling pathway to improve depression-like symptoms. |
format | Online Article Text |
id | pubmed-10010188 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Dove |
record_format | MEDLINE/PubMed |
spelling | pubmed-100101882023-03-14 Integrating Network Pharmacology, Molecular Docking and Pharmacological Evaluation for Exploring the Polyrhachis vicina Rogers in Ameliorating Depression He, Junhui Han, Dongbo Jia, Chunlian Xie, Jiaxiu Zhu, Fucui Wei, Jie Li, Dongmei Wei, Dongmei Li, Yi Tang, Li Wei, Guining Yan, Jing Tong, Yuanming Yang, Lifang Tan, Xuecai Drug Des Devel Ther Original Research PURPOSE: To investigate the mechanisms of antidepressant action of active fraction of Polyrhachis vicina Rogers (AFPR) through network pharmacology, molecular docking and experimental validation. METHODS: GC-MS was used to predict chemical compounds, corresponding databases were used to predict chemical compound targets and depression targets, Cytoscape software was used to construct and analyze the protein interaction network map, DAVID database was used to analyze gene ontology (GO) and KEGG signaling pathway, and AGFR software was used to perform molecular docking. Subsequently, the underlying action mechanisms of AFPR on depression predicted by network pharmacology analyses were experimentally validated in a CORT-induced depression model in vitro and in vivo. RESULTS: A total of 52 potential targets of AFPR on antidepressant were obtained. GO is mainly related to chemical synaptic transmission, signal transduction and others. KEGG signaling pathways are mainly related to cAMP signaling pathway and C-type lectin receptor signaling pathway. The experiment results showed that AFPR significantly increased the expression of PRKACA, CREB and BDNF in mouse brain tissue and PC12 cells. Furthermore, after interfered of cAMP in PC12 cells, the decreased expression of PRKACA, CREB and BDNF was reversed by AFPR. CONCLUSION: AFPR may exert antidepressant effects through multiple components, targets and pathways. Furthermore, it could improve neuroplasticity via the cAMP signaling pathway to improve depression-like symptoms. Dove 2023-03-09 /pmc/articles/PMC10010188/ /pubmed/36923105 http://dx.doi.org/10.2147/DDDT.S399183 Text en © 2023 He et al. https://creativecommons.org/licenses/by-nc/3.0/This work is published and licensed by Dove Medical Press Limited. The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/ (https://creativecommons.org/licenses/by-nc/3.0/) ). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed. For permission for commercial use of this work, please see paragraphs 4.2 and 5 of our Terms (https://www.dovepress.com/terms.php). |
spellingShingle | Original Research He, Junhui Han, Dongbo Jia, Chunlian Xie, Jiaxiu Zhu, Fucui Wei, Jie Li, Dongmei Wei, Dongmei Li, Yi Tang, Li Wei, Guining Yan, Jing Tong, Yuanming Yang, Lifang Tan, Xuecai Integrating Network Pharmacology, Molecular Docking and Pharmacological Evaluation for Exploring the Polyrhachis vicina Rogers in Ameliorating Depression |
title | Integrating Network Pharmacology, Molecular Docking and Pharmacological Evaluation for Exploring the Polyrhachis vicina Rogers in Ameliorating Depression |
title_full | Integrating Network Pharmacology, Molecular Docking and Pharmacological Evaluation for Exploring the Polyrhachis vicina Rogers in Ameliorating Depression |
title_fullStr | Integrating Network Pharmacology, Molecular Docking and Pharmacological Evaluation for Exploring the Polyrhachis vicina Rogers in Ameliorating Depression |
title_full_unstemmed | Integrating Network Pharmacology, Molecular Docking and Pharmacological Evaluation for Exploring the Polyrhachis vicina Rogers in Ameliorating Depression |
title_short | Integrating Network Pharmacology, Molecular Docking and Pharmacological Evaluation for Exploring the Polyrhachis vicina Rogers in Ameliorating Depression |
title_sort | integrating network pharmacology, molecular docking and pharmacological evaluation for exploring the polyrhachis vicina rogers in ameliorating depression |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10010188/ https://www.ncbi.nlm.nih.gov/pubmed/36923105 http://dx.doi.org/10.2147/DDDT.S399183 |
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