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Drought stress identification of tomato plant using multi-features of hyperspectral imaging and subsample fusion

Drought stress (DS) is one of the most frequently occurring stresses in tomato plants. Detecting tomato plant DS is vital for optimizing irrigation and improving fruit quality. In this study, a DS identification method using the multi-features of hyperspectral imaging (HSI) and subsample fusion was...

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Autores principales: Weng, Shizhuang, Ma, Junjie, Tao, Wentao, Tan, Yujian, Pan, Meijing, Zhang, Zixi, Huang, Linsheng, Zheng, Ling, Zhao, Jinling
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10011179/
https://www.ncbi.nlm.nih.gov/pubmed/36925753
http://dx.doi.org/10.3389/fpls.2023.1073530
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author Weng, Shizhuang
Ma, Junjie
Tao, Wentao
Tan, Yujian
Pan, Meijing
Zhang, Zixi
Huang, Linsheng
Zheng, Ling
Zhao, Jinling
author_facet Weng, Shizhuang
Ma, Junjie
Tao, Wentao
Tan, Yujian
Pan, Meijing
Zhang, Zixi
Huang, Linsheng
Zheng, Ling
Zhao, Jinling
author_sort Weng, Shizhuang
collection PubMed
description Drought stress (DS) is one of the most frequently occurring stresses in tomato plants. Detecting tomato plant DS is vital for optimizing irrigation and improving fruit quality. In this study, a DS identification method using the multi-features of hyperspectral imaging (HSI) and subsample fusion was proposed. First, the HSI images were measured under imaging condition with supplemental blue lights, and the reflectance spectra were extracted from the HSI images of young and mature leaves at different DS levels (well-watered, reduced-watered, and deficient-watered treatment). The effective wavelengths (EWs) were screened by the genetic algorithm. Second, the reference image was determined by ReliefF, and the first four reflectance images of EWs that are weakly correlated with the reference image and mutually irrelevant were obtained using Pearson’s correlation analysis. The reflectance image set (RIS) was determined by evaluating the superposition effect of reflectance images on identification. The spectra of EWs and the image features extracted from the RIS by LeNet-5 were adopted to construct DS identification models based on support vector machine (SVM), random forest, and dense convolutional network. Third, the subsample fusion integrating the spectra and image features of young and mature leaves was used to improve the identification further. The results showed that supplemental blue lights can effectively remove the high-frequency noise and obtain high-quality HSI images. The positive effect of the combination of spectra of EWs and image features for DS identification proved that RIS contains feature information pointing to DS. Global optimal classification performance was achieved by SVM and subsample fusion, with a classification accuracy of 95.90% and 95.78% for calibration and prediction sets, respectively. Overall, the proposed method can provide an accurate and reliable analysis for tomato plant DS and is hoped to be applied to other crop stresses
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spelling pubmed-100111792023-03-15 Drought stress identification of tomato plant using multi-features of hyperspectral imaging and subsample fusion Weng, Shizhuang Ma, Junjie Tao, Wentao Tan, Yujian Pan, Meijing Zhang, Zixi Huang, Linsheng Zheng, Ling Zhao, Jinling Front Plant Sci Plant Science Drought stress (DS) is one of the most frequently occurring stresses in tomato plants. Detecting tomato plant DS is vital for optimizing irrigation and improving fruit quality. In this study, a DS identification method using the multi-features of hyperspectral imaging (HSI) and subsample fusion was proposed. First, the HSI images were measured under imaging condition with supplemental blue lights, and the reflectance spectra were extracted from the HSI images of young and mature leaves at different DS levels (well-watered, reduced-watered, and deficient-watered treatment). The effective wavelengths (EWs) were screened by the genetic algorithm. Second, the reference image was determined by ReliefF, and the first four reflectance images of EWs that are weakly correlated with the reference image and mutually irrelevant were obtained using Pearson’s correlation analysis. The reflectance image set (RIS) was determined by evaluating the superposition effect of reflectance images on identification. The spectra of EWs and the image features extracted from the RIS by LeNet-5 were adopted to construct DS identification models based on support vector machine (SVM), random forest, and dense convolutional network. Third, the subsample fusion integrating the spectra and image features of young and mature leaves was used to improve the identification further. The results showed that supplemental blue lights can effectively remove the high-frequency noise and obtain high-quality HSI images. The positive effect of the combination of spectra of EWs and image features for DS identification proved that RIS contains feature information pointing to DS. Global optimal classification performance was achieved by SVM and subsample fusion, with a classification accuracy of 95.90% and 95.78% for calibration and prediction sets, respectively. Overall, the proposed method can provide an accurate and reliable analysis for tomato plant DS and is hoped to be applied to other crop stresses Frontiers Media S.A. 2023-02-28 /pmc/articles/PMC10011179/ /pubmed/36925753 http://dx.doi.org/10.3389/fpls.2023.1073530 Text en Copyright © 2023 Weng, Ma, Tao, Tan, Pan, Zhang, Huang, Zheng and Zhao https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Weng, Shizhuang
Ma, Junjie
Tao, Wentao
Tan, Yujian
Pan, Meijing
Zhang, Zixi
Huang, Linsheng
Zheng, Ling
Zhao, Jinling
Drought stress identification of tomato plant using multi-features of hyperspectral imaging and subsample fusion
title Drought stress identification of tomato plant using multi-features of hyperspectral imaging and subsample fusion
title_full Drought stress identification of tomato plant using multi-features of hyperspectral imaging and subsample fusion
title_fullStr Drought stress identification of tomato plant using multi-features of hyperspectral imaging and subsample fusion
title_full_unstemmed Drought stress identification of tomato plant using multi-features of hyperspectral imaging and subsample fusion
title_short Drought stress identification of tomato plant using multi-features of hyperspectral imaging and subsample fusion
title_sort drought stress identification of tomato plant using multi-features of hyperspectral imaging and subsample fusion
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10011179/
https://www.ncbi.nlm.nih.gov/pubmed/36925753
http://dx.doi.org/10.3389/fpls.2023.1073530
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