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Predicting alveolar ventilation heterogeneity in pulmonary fibrosis using a non-uniform polyhedral spring network model

Pulmonary Fibrosis (PF) is a deadly disease that has limited treatment options and is caused by excessive deposition and cross-linking of collagen leading to stiffening of the lung parenchyma. The link between lung structure and function in PF remains poorly understood, although its spatially hetero...

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Autores principales: Hall, Joseph K., Bates, Jason H. T., Casey, Dylan T., Bartolák-Suki, Erzsébet, Lutchen, Kenneth R., Suki, Béla
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10013074/
https://www.ncbi.nlm.nih.gov/pubmed/36926543
http://dx.doi.org/10.3389/fnetp.2023.1124223
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author Hall, Joseph K.
Bates, Jason H. T.
Casey, Dylan T.
Bartolák-Suki, Erzsébet
Lutchen, Kenneth R.
Suki, Béla
author_facet Hall, Joseph K.
Bates, Jason H. T.
Casey, Dylan T.
Bartolák-Suki, Erzsébet
Lutchen, Kenneth R.
Suki, Béla
author_sort Hall, Joseph K.
collection PubMed
description Pulmonary Fibrosis (PF) is a deadly disease that has limited treatment options and is caused by excessive deposition and cross-linking of collagen leading to stiffening of the lung parenchyma. The link between lung structure and function in PF remains poorly understood, although its spatially heterogeneous nature has important implications for alveolar ventilation. Computational models of lung parenchyma utilize uniform arrays of space-filling shapes to represent individual alveoli, but have inherent anisotropy, whereas actual lung tissue is isotropic on average. We developed a novel Voronoi-based 3D spring network model of the lung parenchyma, the Amorphous Network, that exhibits more 2D and 3D similarity to lung geometry than regular polyhedral networks. In contrast to regular networks that show anisotropic force transmission, the structural randomness in the Amorphous Network dissipates this anisotropy with important implications for mechanotransduction. We then added agents to the network that were allowed to carry out a random walk to mimic the migratory behavior of fibroblasts. To model progressive fibrosis, agents were moved around the network and increased the stiffness of springs along their path. Agents migrated at various path lengths until a certain percentage of the network was stiffened. Alveolar ventilation heterogeneity increased with both percent of the network stiffened, and walk length of the agents, until the percolation threshold was reached. The bulk modulus of the network also increased with both percent of network stiffened and path length. This model thus represents a step forward in the creation of physiologically accurate computational models of lung tissue disease.
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spelling pubmed-100130742023-03-15 Predicting alveolar ventilation heterogeneity in pulmonary fibrosis using a non-uniform polyhedral spring network model Hall, Joseph K. Bates, Jason H. T. Casey, Dylan T. Bartolák-Suki, Erzsébet Lutchen, Kenneth R. Suki, Béla Front Netw Physiol Network Physiology Pulmonary Fibrosis (PF) is a deadly disease that has limited treatment options and is caused by excessive deposition and cross-linking of collagen leading to stiffening of the lung parenchyma. The link between lung structure and function in PF remains poorly understood, although its spatially heterogeneous nature has important implications for alveolar ventilation. Computational models of lung parenchyma utilize uniform arrays of space-filling shapes to represent individual alveoli, but have inherent anisotropy, whereas actual lung tissue is isotropic on average. We developed a novel Voronoi-based 3D spring network model of the lung parenchyma, the Amorphous Network, that exhibits more 2D and 3D similarity to lung geometry than regular polyhedral networks. In contrast to regular networks that show anisotropic force transmission, the structural randomness in the Amorphous Network dissipates this anisotropy with important implications for mechanotransduction. We then added agents to the network that were allowed to carry out a random walk to mimic the migratory behavior of fibroblasts. To model progressive fibrosis, agents were moved around the network and increased the stiffness of springs along their path. Agents migrated at various path lengths until a certain percentage of the network was stiffened. Alveolar ventilation heterogeneity increased with both percent of the network stiffened, and walk length of the agents, until the percolation threshold was reached. The bulk modulus of the network also increased with both percent of network stiffened and path length. This model thus represents a step forward in the creation of physiologically accurate computational models of lung tissue disease. Frontiers Media S.A. 2023-02-01 /pmc/articles/PMC10013074/ /pubmed/36926543 http://dx.doi.org/10.3389/fnetp.2023.1124223 Text en Copyright © 2023 Hall, Bates, Casey, Bartolák-Suki, Lutchen and Suki. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Network Physiology
Hall, Joseph K.
Bates, Jason H. T.
Casey, Dylan T.
Bartolák-Suki, Erzsébet
Lutchen, Kenneth R.
Suki, Béla
Predicting alveolar ventilation heterogeneity in pulmonary fibrosis using a non-uniform polyhedral spring network model
title Predicting alveolar ventilation heterogeneity in pulmonary fibrosis using a non-uniform polyhedral spring network model
title_full Predicting alveolar ventilation heterogeneity in pulmonary fibrosis using a non-uniform polyhedral spring network model
title_fullStr Predicting alveolar ventilation heterogeneity in pulmonary fibrosis using a non-uniform polyhedral spring network model
title_full_unstemmed Predicting alveolar ventilation heterogeneity in pulmonary fibrosis using a non-uniform polyhedral spring network model
title_short Predicting alveolar ventilation heterogeneity in pulmonary fibrosis using a non-uniform polyhedral spring network model
title_sort predicting alveolar ventilation heterogeneity in pulmonary fibrosis using a non-uniform polyhedral spring network model
topic Network Physiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10013074/
https://www.ncbi.nlm.nih.gov/pubmed/36926543
http://dx.doi.org/10.3389/fnetp.2023.1124223
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