Cargando…

Integrative applications of network pharmacology and molecular docking: An herbal formula ameliorates H9c2 cells injury through pyroptosis

BACKGROUND: QiShen YiQi pills (QSYQ) is a Traditional Chinese Medicine (TCM) formula, which has a significant effect on the treatment of patients with myocardial infarction (MI) in clinical practice. However, the molecular mechanism of QSYQ regulation pyroptosis after MI is still not fully known. He...

Descripción completa

Detalles Bibliográficos
Autores principales: Qi, Zhongwen, Yan, Zhipeng, Wang, Yueyao, Ji, Nan, Yang, Xiaoya, Zhang, Ao, Li, Meng, Xu, Fengqin, Zhang, Junping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10014185/
https://www.ncbi.nlm.nih.gov/pubmed/36926601
http://dx.doi.org/10.1016/j.jgr.2022.03.003
_version_ 1784906943190532096
author Qi, Zhongwen
Yan, Zhipeng
Wang, Yueyao
Ji, Nan
Yang, Xiaoya
Zhang, Ao
Li, Meng
Xu, Fengqin
Zhang, Junping
author_facet Qi, Zhongwen
Yan, Zhipeng
Wang, Yueyao
Ji, Nan
Yang, Xiaoya
Zhang, Ao
Li, Meng
Xu, Fengqin
Zhang, Junping
author_sort Qi, Zhongwen
collection PubMed
description BACKGROUND: QiShen YiQi pills (QSYQ) is a Traditional Chinese Medicine (TCM) formula, which has a significant effect on the treatment of patients with myocardial infarction (MI) in clinical practice. However, the molecular mechanism of QSYQ regulation pyroptosis after MI is still not fully known. Hence, this study was designed to reveal the mechanism of the active ingredient in QSYQ. METHODS: Integrated approach of network pharmacology and molecular docking, were conducted to screen active components and corresponding common target genes of QSYQ in intervening pyroptosis after MI. Subsequently, STRING and Cytoscape were applied to construct a PPI network, and obtain candidate active compounds. Molecular docking was performed to verify the binding ability of candidate components to pyroptosis proteins and oxygen-glucose deprivation (OGD) induced cardiomyocytes injuries were applied to explore the protective effect and mechanism of the candidate drug. RESULTS: Two drug-likeness compounds were preliminarily selected, and the binding capacity between Ginsenoside Rh2 (Rh2) and key target High Mobility Group Box 1 (HMGB1)was validated in the form of hydrogen bonding. 2 μM Rh2 prevented OGD-induced H9c2 death and reduced IL-18 and IL-1β levels, possibly by decreasing the activation of the NLRP3 inflammasome, inhibiting the expression of p12-caspase1, and attenuating the level of pyroptosis executive protein GSDMD-N. CONCLUSIONS: We propose that Rh2 of QSYQ can protect myocardial cells partially by ameliorating pyroptosis, which seems to have a new insight regarding the therapeutic potential for MI.
format Online
Article
Text
id pubmed-10014185
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-100141852023-03-15 Integrative applications of network pharmacology and molecular docking: An herbal formula ameliorates H9c2 cells injury through pyroptosis Qi, Zhongwen Yan, Zhipeng Wang, Yueyao Ji, Nan Yang, Xiaoya Zhang, Ao Li, Meng Xu, Fengqin Zhang, Junping J Ginseng Res Research Article BACKGROUND: QiShen YiQi pills (QSYQ) is a Traditional Chinese Medicine (TCM) formula, which has a significant effect on the treatment of patients with myocardial infarction (MI) in clinical practice. However, the molecular mechanism of QSYQ regulation pyroptosis after MI is still not fully known. Hence, this study was designed to reveal the mechanism of the active ingredient in QSYQ. METHODS: Integrated approach of network pharmacology and molecular docking, were conducted to screen active components and corresponding common target genes of QSYQ in intervening pyroptosis after MI. Subsequently, STRING and Cytoscape were applied to construct a PPI network, and obtain candidate active compounds. Molecular docking was performed to verify the binding ability of candidate components to pyroptosis proteins and oxygen-glucose deprivation (OGD) induced cardiomyocytes injuries were applied to explore the protective effect and mechanism of the candidate drug. RESULTS: Two drug-likeness compounds were preliminarily selected, and the binding capacity between Ginsenoside Rh2 (Rh2) and key target High Mobility Group Box 1 (HMGB1)was validated in the form of hydrogen bonding. 2 μM Rh2 prevented OGD-induced H9c2 death and reduced IL-18 and IL-1β levels, possibly by decreasing the activation of the NLRP3 inflammasome, inhibiting the expression of p12-caspase1, and attenuating the level of pyroptosis executive protein GSDMD-N. CONCLUSIONS: We propose that Rh2 of QSYQ can protect myocardial cells partially by ameliorating pyroptosis, which seems to have a new insight regarding the therapeutic potential for MI. Elsevier 2023-03 2022-03-28 /pmc/articles/PMC10014185/ /pubmed/36926601 http://dx.doi.org/10.1016/j.jgr.2022.03.003 Text en © 2022 The Korean Society of Ginseng. Publishing services by Elsevier B.V. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research Article
Qi, Zhongwen
Yan, Zhipeng
Wang, Yueyao
Ji, Nan
Yang, Xiaoya
Zhang, Ao
Li, Meng
Xu, Fengqin
Zhang, Junping
Integrative applications of network pharmacology and molecular docking: An herbal formula ameliorates H9c2 cells injury through pyroptosis
title Integrative applications of network pharmacology and molecular docking: An herbal formula ameliorates H9c2 cells injury through pyroptosis
title_full Integrative applications of network pharmacology and molecular docking: An herbal formula ameliorates H9c2 cells injury through pyroptosis
title_fullStr Integrative applications of network pharmacology and molecular docking: An herbal formula ameliorates H9c2 cells injury through pyroptosis
title_full_unstemmed Integrative applications of network pharmacology and molecular docking: An herbal formula ameliorates H9c2 cells injury through pyroptosis
title_short Integrative applications of network pharmacology and molecular docking: An herbal formula ameliorates H9c2 cells injury through pyroptosis
title_sort integrative applications of network pharmacology and molecular docking: an herbal formula ameliorates h9c2 cells injury through pyroptosis
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10014185/
https://www.ncbi.nlm.nih.gov/pubmed/36926601
http://dx.doi.org/10.1016/j.jgr.2022.03.003
work_keys_str_mv AT qizhongwen integrativeapplicationsofnetworkpharmacologyandmoleculardockinganherbalformulaamelioratesh9c2cellsinjurythroughpyroptosis
AT yanzhipeng integrativeapplicationsofnetworkpharmacologyandmoleculardockinganherbalformulaamelioratesh9c2cellsinjurythroughpyroptosis
AT wangyueyao integrativeapplicationsofnetworkpharmacologyandmoleculardockinganherbalformulaamelioratesh9c2cellsinjurythroughpyroptosis
AT jinan integrativeapplicationsofnetworkpharmacologyandmoleculardockinganherbalformulaamelioratesh9c2cellsinjurythroughpyroptosis
AT yangxiaoya integrativeapplicationsofnetworkpharmacologyandmoleculardockinganherbalformulaamelioratesh9c2cellsinjurythroughpyroptosis
AT zhangao integrativeapplicationsofnetworkpharmacologyandmoleculardockinganherbalformulaamelioratesh9c2cellsinjurythroughpyroptosis
AT limeng integrativeapplicationsofnetworkpharmacologyandmoleculardockinganherbalformulaamelioratesh9c2cellsinjurythroughpyroptosis
AT xufengqin integrativeapplicationsofnetworkpharmacologyandmoleculardockinganherbalformulaamelioratesh9c2cellsinjurythroughpyroptosis
AT zhangjunping integrativeapplicationsofnetworkpharmacologyandmoleculardockinganherbalformulaamelioratesh9c2cellsinjurythroughpyroptosis