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Are deep models in radiomics performing better than generic models? A systematic review

BACKGROUND: Application of radiomics proceeds by extracting and analysing imaging features based on generic morphological, textural, and statistical features defined by formulas. Recently, deep learning methods were applied. It is unclear whether deep models (DMs) can outperform generic models (GMs)...

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Autor principal: Demircioğlu, Aydin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Vienna 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10014394/
https://www.ncbi.nlm.nih.gov/pubmed/36918479
http://dx.doi.org/10.1186/s41747-023-00325-0
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author Demircioğlu, Aydin
author_facet Demircioğlu, Aydin
author_sort Demircioğlu, Aydin
collection PubMed
description BACKGROUND: Application of radiomics proceeds by extracting and analysing imaging features based on generic morphological, textural, and statistical features defined by formulas. Recently, deep learning methods were applied. It is unclear whether deep models (DMs) can outperform generic models (GMs). METHODS: We identified publications on PubMed and Embase to determine differences between DMs and GMs in terms of receiver operating area under the curve (AUC). RESULTS: Of 1,229 records (between 2017 and 2021), 69 studies were included, 61 (88%) on tumours, 68 (99%) retrospective, and 39 (56%) single centre; 30 (43%) used an internal validation cohort; and 18 (26%) applied cross-validation. Studies with independent internal cohort had a median training sample of 196 (range 41–1,455); those with cross-validation had only 133 (43–1,426). Median size of validation cohorts was 73 (18–535) for internal and 94 (18–388) for external. Considering the internal validation, in 74% (49/66), the DMs performed better than the GMs, vice versa in 20% (13/66); no difference in 6% (4/66); and median difference in AUC 0.045. On the external validation, DMs were better in 65% (13/20), GMs in 20% (4/20) cases; no difference in 3 (15%); and median difference in AUC 0.025. On internal validation, fused models outperformed GMs and DMs in 72% (20/28), while they were worse in 14% (4/28) and equal in 14% (4/28); median gain in AUC was + 0.02. On external validation, fused model performed better in 63% (5/8), worse in 25% (2/8), and equal in 13% (1/8); median gain in AUC was + 0.025. CONCLUSIONS: Overall, DMs outperformed GMs but in 26% of the studies, DMs did not outperform GMs. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s41747-023-00325-0.
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spelling pubmed-100143942023-03-15 Are deep models in radiomics performing better than generic models? A systematic review Demircioğlu, Aydin Eur Radiol Exp Systematic Review BACKGROUND: Application of radiomics proceeds by extracting and analysing imaging features based on generic morphological, textural, and statistical features defined by formulas. Recently, deep learning methods were applied. It is unclear whether deep models (DMs) can outperform generic models (GMs). METHODS: We identified publications on PubMed and Embase to determine differences between DMs and GMs in terms of receiver operating area under the curve (AUC). RESULTS: Of 1,229 records (between 2017 and 2021), 69 studies were included, 61 (88%) on tumours, 68 (99%) retrospective, and 39 (56%) single centre; 30 (43%) used an internal validation cohort; and 18 (26%) applied cross-validation. Studies with independent internal cohort had a median training sample of 196 (range 41–1,455); those with cross-validation had only 133 (43–1,426). Median size of validation cohorts was 73 (18–535) for internal and 94 (18–388) for external. Considering the internal validation, in 74% (49/66), the DMs performed better than the GMs, vice versa in 20% (13/66); no difference in 6% (4/66); and median difference in AUC 0.045. On the external validation, DMs were better in 65% (13/20), GMs in 20% (4/20) cases; no difference in 3 (15%); and median difference in AUC 0.025. On internal validation, fused models outperformed GMs and DMs in 72% (20/28), while they were worse in 14% (4/28) and equal in 14% (4/28); median gain in AUC was + 0.02. On external validation, fused model performed better in 63% (5/8), worse in 25% (2/8), and equal in 13% (1/8); median gain in AUC was + 0.025. CONCLUSIONS: Overall, DMs outperformed GMs but in 26% of the studies, DMs did not outperform GMs. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s41747-023-00325-0. Springer Vienna 2023-03-15 /pmc/articles/PMC10014394/ /pubmed/36918479 http://dx.doi.org/10.1186/s41747-023-00325-0 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Systematic Review
Demircioğlu, Aydin
Are deep models in radiomics performing better than generic models? A systematic review
title Are deep models in radiomics performing better than generic models? A systematic review
title_full Are deep models in radiomics performing better than generic models? A systematic review
title_fullStr Are deep models in radiomics performing better than generic models? A systematic review
title_full_unstemmed Are deep models in radiomics performing better than generic models? A systematic review
title_short Are deep models in radiomics performing better than generic models? A systematic review
title_sort are deep models in radiomics performing better than generic models? a systematic review
topic Systematic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10014394/
https://www.ncbi.nlm.nih.gov/pubmed/36918479
http://dx.doi.org/10.1186/s41747-023-00325-0
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