Cargando…

Stronger linkage of diversity-carbon decomposition for rare rather than abundant bacteria in woodland soils

Soil microbial diversity is important for maintaining ecosystem functions. However, the linkage between microbial diversity, especially rare and abundant bacterial diversity, and carbon decomposition remains largely unknown. In this study, we assessed the establishment and maintenance of rare and ab...

Descripción completa

Detalles Bibliográficos
Autores principales: Cao, Hui, Li, Suying, He, Huan, Sun, Yaoqin, Wu, Yichao, Huang, Qiaoyun, Cai, Peng, Gao, Chun-Hui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10017465/
https://www.ncbi.nlm.nih.gov/pubmed/36937304
http://dx.doi.org/10.3389/fmicb.2023.1115300
_version_ 1784907591122419712
author Cao, Hui
Li, Suying
He, Huan
Sun, Yaoqin
Wu, Yichao
Huang, Qiaoyun
Cai, Peng
Gao, Chun-Hui
author_facet Cao, Hui
Li, Suying
He, Huan
Sun, Yaoqin
Wu, Yichao
Huang, Qiaoyun
Cai, Peng
Gao, Chun-Hui
author_sort Cao, Hui
collection PubMed
description Soil microbial diversity is important for maintaining ecosystem functions. However, the linkage between microbial diversity, especially rare and abundant bacterial diversity, and carbon decomposition remains largely unknown. In this study, we assessed the establishment and maintenance of rare and abundant bacterial α-diversities at the taxonomic and phylogenetic levels and their linkages with soil carbon decomposition separately in four Chinese woodlands. Compared to abundant bacteria, rare bacteria showed higher community diversity, tighter phylogenetic clustering, wider environmental breadth, stronger phylogenetic signals, and higher functional redundancy. The assembly of the abundant bacterial subcommunity was governed by stochastic (59.2%) and deterministic (41.8%) processes, whereas the assembly of the rare bacterial subcommunity was mainly dominated by deterministic processes (85.8%). Furthermore, total phosphorus, soil pH, and ammonium nitrogen balanced stochastic and deterministic processes in both rare and abundant bacterial subcommunities. Our results reveal that rare bacteria displayed stronger environmental adaptability and environmental constraint. Importantly, the α-diversities of rare taxa, rather than abundant taxa, were significantly related to carbon decomposition. This study provides a holistic understanding of biogeographic patterns of abundant and rare bacteria and their α-diversities in relation to carbon decomposition, thus helping us better predict and regulate carbon dynamics under the background of global climate change.
format Online
Article
Text
id pubmed-10017465
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-100174652023-03-17 Stronger linkage of diversity-carbon decomposition for rare rather than abundant bacteria in woodland soils Cao, Hui Li, Suying He, Huan Sun, Yaoqin Wu, Yichao Huang, Qiaoyun Cai, Peng Gao, Chun-Hui Front Microbiol Microbiology Soil microbial diversity is important for maintaining ecosystem functions. However, the linkage between microbial diversity, especially rare and abundant bacterial diversity, and carbon decomposition remains largely unknown. In this study, we assessed the establishment and maintenance of rare and abundant bacterial α-diversities at the taxonomic and phylogenetic levels and their linkages with soil carbon decomposition separately in four Chinese woodlands. Compared to abundant bacteria, rare bacteria showed higher community diversity, tighter phylogenetic clustering, wider environmental breadth, stronger phylogenetic signals, and higher functional redundancy. The assembly of the abundant bacterial subcommunity was governed by stochastic (59.2%) and deterministic (41.8%) processes, whereas the assembly of the rare bacterial subcommunity was mainly dominated by deterministic processes (85.8%). Furthermore, total phosphorus, soil pH, and ammonium nitrogen balanced stochastic and deterministic processes in both rare and abundant bacterial subcommunities. Our results reveal that rare bacteria displayed stronger environmental adaptability and environmental constraint. Importantly, the α-diversities of rare taxa, rather than abundant taxa, were significantly related to carbon decomposition. This study provides a holistic understanding of biogeographic patterns of abundant and rare bacteria and their α-diversities in relation to carbon decomposition, thus helping us better predict and regulate carbon dynamics under the background of global climate change. Frontiers Media S.A. 2023-03-02 /pmc/articles/PMC10017465/ /pubmed/36937304 http://dx.doi.org/10.3389/fmicb.2023.1115300 Text en Copyright © 2023 Cao, Li, He, Sun, Wu, Huang, Cai and Gao. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Cao, Hui
Li, Suying
He, Huan
Sun, Yaoqin
Wu, Yichao
Huang, Qiaoyun
Cai, Peng
Gao, Chun-Hui
Stronger linkage of diversity-carbon decomposition for rare rather than abundant bacteria in woodland soils
title Stronger linkage of diversity-carbon decomposition for rare rather than abundant bacteria in woodland soils
title_full Stronger linkage of diversity-carbon decomposition for rare rather than abundant bacteria in woodland soils
title_fullStr Stronger linkage of diversity-carbon decomposition for rare rather than abundant bacteria in woodland soils
title_full_unstemmed Stronger linkage of diversity-carbon decomposition for rare rather than abundant bacteria in woodland soils
title_short Stronger linkage of diversity-carbon decomposition for rare rather than abundant bacteria in woodland soils
title_sort stronger linkage of diversity-carbon decomposition for rare rather than abundant bacteria in woodland soils
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10017465/
https://www.ncbi.nlm.nih.gov/pubmed/36937304
http://dx.doi.org/10.3389/fmicb.2023.1115300
work_keys_str_mv AT caohui strongerlinkageofdiversitycarbondecompositionforrareratherthanabundantbacteriainwoodlandsoils
AT lisuying strongerlinkageofdiversitycarbondecompositionforrareratherthanabundantbacteriainwoodlandsoils
AT hehuan strongerlinkageofdiversitycarbondecompositionforrareratherthanabundantbacteriainwoodlandsoils
AT sunyaoqin strongerlinkageofdiversitycarbondecompositionforrareratherthanabundantbacteriainwoodlandsoils
AT wuyichao strongerlinkageofdiversitycarbondecompositionforrareratherthanabundantbacteriainwoodlandsoils
AT huangqiaoyun strongerlinkageofdiversitycarbondecompositionforrareratherthanabundantbacteriainwoodlandsoils
AT caipeng strongerlinkageofdiversitycarbondecompositionforrareratherthanabundantbacteriainwoodlandsoils
AT gaochunhui strongerlinkageofdiversitycarbondecompositionforrareratherthanabundantbacteriainwoodlandsoils