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Bioinformatics analysis of Omp19 and Omp25 proteins for designing multi-epitope vaccines against Brucella

Brucellosis is a zoonotic disease caused by Brucella. There is no effective vaccine against human brucellosis. Omp19 and Omp25 are the outer membrane proteins of Brucella. They are widely expressed and highly conserved in Brucella and have high immunogenicity. Herein, we aim to identify multi-epitop...

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Autores principales: Shi, Donghao, Chen, Yuan, Chen, Muzhi, Zhou, Tingting, Xu, Feili, Zhang, Chao, Wang, Changmin, Li, Zhiwei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Lippincott Williams & Wilkins 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10019172/
https://www.ncbi.nlm.nih.gov/pubmed/36930131
http://dx.doi.org/10.1097/MD.0000000000033182
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author Shi, Donghao
Chen, Yuan
Chen, Muzhi
Zhou, Tingting
Xu, Feili
Zhang, Chao
Wang, Changmin
Li, Zhiwei
author_facet Shi, Donghao
Chen, Yuan
Chen, Muzhi
Zhou, Tingting
Xu, Feili
Zhang, Chao
Wang, Changmin
Li, Zhiwei
author_sort Shi, Donghao
collection PubMed
description Brucellosis is a zoonotic disease caused by Brucella. There is no effective vaccine against human brucellosis. Omp19 and Omp25 are the outer membrane proteins of Brucella. They are widely expressed and highly conserved in Brucella and have high immunogenicity. Herein, we aim to identify multi-epitope vaccine candidates based on Omp19 and Omp25. We analyzed the physicochemical properties and protein structure of Omp19 and Omp25, and predicted the corresponding B cell and T cell epitopes using bioinformatics analysis. Omp19 and Omp25 were composed of 177 amino acids and 213 amino acids, respectively. They were both stable hydrophilic proteins. The instability indices were 44.8 and 23, respectively. The hydrophilicity was −0.1 and −0.317, respectively. In the secondary structure of Omp19 and Omp25 proteins, the α-helix accounted for 12.43% and 23.94%, the β-sheet was 18.64% and 23.47%, the β-turn was 6.78% and 4.23%, and the random coil was 62.15% and 48.36%. Finally, 5 B cell epitopes, 3 Th-cell epitopes and 5 CTL cell epitopes of Omp19 protein, and 4 B cell epitopes, 3 Th-cell epitopes, and 5 CTL cell epitopes of Omp25 protein were selected as vaccine candidates. In conclusion, we obtained potential B cell and T cell epitopes of the Brucella outer membrane Omp19 and Omp25 proteins. This lays the foundation for the further design of multi-epitope vaccine of Brucella.
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spelling pubmed-100191722023-03-17 Bioinformatics analysis of Omp19 and Omp25 proteins for designing multi-epitope vaccines against Brucella Shi, Donghao Chen, Yuan Chen, Muzhi Zhou, Tingting Xu, Feili Zhang, Chao Wang, Changmin Li, Zhiwei Medicine (Baltimore) 3700 Brucellosis is a zoonotic disease caused by Brucella. There is no effective vaccine against human brucellosis. Omp19 and Omp25 are the outer membrane proteins of Brucella. They are widely expressed and highly conserved in Brucella and have high immunogenicity. Herein, we aim to identify multi-epitope vaccine candidates based on Omp19 and Omp25. We analyzed the physicochemical properties and protein structure of Omp19 and Omp25, and predicted the corresponding B cell and T cell epitopes using bioinformatics analysis. Omp19 and Omp25 were composed of 177 amino acids and 213 amino acids, respectively. They were both stable hydrophilic proteins. The instability indices were 44.8 and 23, respectively. The hydrophilicity was −0.1 and −0.317, respectively. In the secondary structure of Omp19 and Omp25 proteins, the α-helix accounted for 12.43% and 23.94%, the β-sheet was 18.64% and 23.47%, the β-turn was 6.78% and 4.23%, and the random coil was 62.15% and 48.36%. Finally, 5 B cell epitopes, 3 Th-cell epitopes and 5 CTL cell epitopes of Omp19 protein, and 4 B cell epitopes, 3 Th-cell epitopes, and 5 CTL cell epitopes of Omp25 protein were selected as vaccine candidates. In conclusion, we obtained potential B cell and T cell epitopes of the Brucella outer membrane Omp19 and Omp25 proteins. This lays the foundation for the further design of multi-epitope vaccine of Brucella. Lippincott Williams & Wilkins 2023-03-17 /pmc/articles/PMC10019172/ /pubmed/36930131 http://dx.doi.org/10.1097/MD.0000000000033182 Text en Copyright © 2023 the Author(s). Published by Wolters Kluwer Health, Inc. https://creativecommons.org/licenses/by-nc/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution-Non Commercial License 4.0 (CCBY-NC) (https://creativecommons.org/licenses/by-nc/4.0/) , where it is permissible to download, share, remix, transform, and buildup the work provided it is properly cited. The work cannot be used commercially without permission from the journal.
spellingShingle 3700
Shi, Donghao
Chen, Yuan
Chen, Muzhi
Zhou, Tingting
Xu, Feili
Zhang, Chao
Wang, Changmin
Li, Zhiwei
Bioinformatics analysis of Omp19 and Omp25 proteins for designing multi-epitope vaccines against Brucella
title Bioinformatics analysis of Omp19 and Omp25 proteins for designing multi-epitope vaccines against Brucella
title_full Bioinformatics analysis of Omp19 and Omp25 proteins for designing multi-epitope vaccines against Brucella
title_fullStr Bioinformatics analysis of Omp19 and Omp25 proteins for designing multi-epitope vaccines against Brucella
title_full_unstemmed Bioinformatics analysis of Omp19 and Omp25 proteins for designing multi-epitope vaccines against Brucella
title_short Bioinformatics analysis of Omp19 and Omp25 proteins for designing multi-epitope vaccines against Brucella
title_sort bioinformatics analysis of omp19 and omp25 proteins for designing multi-epitope vaccines against brucella
topic 3700
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10019172/
https://www.ncbi.nlm.nih.gov/pubmed/36930131
http://dx.doi.org/10.1097/MD.0000000000033182
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