Hybrid Assembly from 75 E. coli Genomes Isolated from French Bovine Food Products between 1995 and 2016

Here, we report the complete (or near-complete) genome sequences of 75 Escherichia coli isolates, including 71 stx-positive E. coli isolates, isolated in France between 1995 and 2016 from food of bovine origin. Genomes were assembled using a combination of long- and short-read sequencing.

Detalles Bibliográficos
Autores principales: Jaudou, Sandra, Tran, Mai-Lan, Vorimore, Fabien, Fach, Patrick, Delannoy, Sabine
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2023
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10019233/
https://www.ncbi.nlm.nih.gov/pubmed/36722944
http://dx.doi.org/10.1128/mra.01095-22
_version_ 1784907984708567040
author Jaudou, Sandra
Tran, Mai-Lan
Vorimore, Fabien
Fach, Patrick
Delannoy, Sabine
author_facet Jaudou, Sandra
Tran, Mai-Lan
Vorimore, Fabien
Fach, Patrick
Delannoy, Sabine
author_sort Jaudou, Sandra
collection PubMed
description Here, we report the complete (or near-complete) genome sequences of 75 Escherichia coli isolates, including 71 stx-positive E. coli isolates, isolated in France between 1995 and 2016 from food of bovine origin. Genomes were assembled using a combination of long- and short-read sequencing.
format Online
Article
Text
id pubmed-10019233
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher American Society for Microbiology
record_format MEDLINE/PubMed
spelling pubmed-100192332023-03-17 Hybrid Assembly from 75 E. coli Genomes Isolated from French Bovine Food Products between 1995 and 2016 Jaudou, Sandra Tran, Mai-Lan Vorimore, Fabien Fach, Patrick Delannoy, Sabine Microbiol Resour Announc Genome Sequences Here, we report the complete (or near-complete) genome sequences of 75 Escherichia coli isolates, including 71 stx-positive E. coli isolates, isolated in France between 1995 and 2016 from food of bovine origin. Genomes were assembled using a combination of long- and short-read sequencing. American Society for Microbiology 2023-02-01 /pmc/articles/PMC10019233/ /pubmed/36722944 http://dx.doi.org/10.1128/mra.01095-22 Text en Copyright © 2023 Jaudou et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Jaudou, Sandra
Tran, Mai-Lan
Vorimore, Fabien
Fach, Patrick
Delannoy, Sabine
Hybrid Assembly from 75 E. coli Genomes Isolated from French Bovine Food Products between 1995 and 2016
title Hybrid Assembly from 75 E. coli Genomes Isolated from French Bovine Food Products between 1995 and 2016
title_full Hybrid Assembly from 75 E. coli Genomes Isolated from French Bovine Food Products between 1995 and 2016
title_fullStr Hybrid Assembly from 75 E. coli Genomes Isolated from French Bovine Food Products between 1995 and 2016
title_full_unstemmed Hybrid Assembly from 75 E. coli Genomes Isolated from French Bovine Food Products between 1995 and 2016
title_short Hybrid Assembly from 75 E. coli Genomes Isolated from French Bovine Food Products between 1995 and 2016
title_sort hybrid assembly from 75 e. coli genomes isolated from french bovine food products between 1995 and 2016
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10019233/
https://www.ncbi.nlm.nih.gov/pubmed/36722944
http://dx.doi.org/10.1128/mra.01095-22
work_keys_str_mv AT jaudousandra hybridassemblyfrom75ecoligenomesisolatedfromfrenchbovinefoodproductsbetween1995and2016
AT tranmailan hybridassemblyfrom75ecoligenomesisolatedfromfrenchbovinefoodproductsbetween1995and2016
AT vorimorefabien hybridassemblyfrom75ecoligenomesisolatedfromfrenchbovinefoodproductsbetween1995and2016
AT fachpatrick hybridassemblyfrom75ecoligenomesisolatedfromfrenchbovinefoodproductsbetween1995and2016
AT delannoysabine hybridassemblyfrom75ecoligenomesisolatedfromfrenchbovinefoodproductsbetween1995and2016

Ejemplares similares