Complete Genome Sequences of Caldicellulosiruptor acetigenus DSM 7040, Caldicellulosiruptor morganii DSM 8990 (RT8.B8), and Caldicellulosiruptor naganoensis DSM 8991 (NA10)

The genome sequences of three extremely thermophilic, lignocellulolytic Caldicellulosiruptor species were closed, improving previously reported multiple-contig assemblies. All 14 classified Caldicellulosiruptor spp. now have closed genomes. Genome closure will enhance bioinformatic analysis of the s...

Descripción completa

Detalles Bibliográficos
Autores principales: Bing, Ryan G., Willard, Daniel J., Manesh, Mohamad J. H., Laemthong, Tunyaboon, Crosby, James R., Adams, Michael W. W., Kelly, Robert M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2023
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10019236/
https://www.ncbi.nlm.nih.gov/pubmed/36722965
http://dx.doi.org/10.1128/mra.01292-22
_version_ 1784907985450958848
author Bing, Ryan G.
Willard, Daniel J.
Manesh, Mohamad J. H.
Laemthong, Tunyaboon
Crosby, James R.
Adams, Michael W. W.
Kelly, Robert M.
author_facet Bing, Ryan G.
Willard, Daniel J.
Manesh, Mohamad J. H.
Laemthong, Tunyaboon
Crosby, James R.
Adams, Michael W. W.
Kelly, Robert M.
author_sort Bing, Ryan G.
collection PubMed
description The genome sequences of three extremely thermophilic, lignocellulolytic Caldicellulosiruptor species were closed, improving previously reported multiple-contig assemblies. All 14 classified Caldicellulosiruptor spp. now have closed genomes. Genome closure will enhance bioinformatic analysis of the species, including identification of carbohydrate-active enzymes (CAZymes) and comparison against other Caldicellulosiruptor species and lignocellulolytic microorganisms.
format Online
Article
Text
id pubmed-10019236
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher American Society for Microbiology
record_format MEDLINE/PubMed
spelling pubmed-100192362023-03-17 Complete Genome Sequences of Caldicellulosiruptor acetigenus DSM 7040, Caldicellulosiruptor morganii DSM 8990 (RT8.B8), and Caldicellulosiruptor naganoensis DSM 8991 (NA10) Bing, Ryan G. Willard, Daniel J. Manesh, Mohamad J. H. Laemthong, Tunyaboon Crosby, James R. Adams, Michael W. W. Kelly, Robert M. Microbiol Resour Announc Genome Sequences The genome sequences of three extremely thermophilic, lignocellulolytic Caldicellulosiruptor species were closed, improving previously reported multiple-contig assemblies. All 14 classified Caldicellulosiruptor spp. now have closed genomes. Genome closure will enhance bioinformatic analysis of the species, including identification of carbohydrate-active enzymes (CAZymes) and comparison against other Caldicellulosiruptor species and lignocellulolytic microorganisms. American Society for Microbiology 2023-02-01 /pmc/articles/PMC10019236/ /pubmed/36722965 http://dx.doi.org/10.1128/mra.01292-22 Text en Copyright © 2023 Bing et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Bing, Ryan G.
Willard, Daniel J.
Manesh, Mohamad J. H.
Laemthong, Tunyaboon
Crosby, James R.
Adams, Michael W. W.
Kelly, Robert M.
Complete Genome Sequences of Caldicellulosiruptor acetigenus DSM 7040, Caldicellulosiruptor morganii DSM 8990 (RT8.B8), and Caldicellulosiruptor naganoensis DSM 8991 (NA10)
title Complete Genome Sequences of Caldicellulosiruptor acetigenus DSM 7040, Caldicellulosiruptor morganii DSM 8990 (RT8.B8), and Caldicellulosiruptor naganoensis DSM 8991 (NA10)
title_full Complete Genome Sequences of Caldicellulosiruptor acetigenus DSM 7040, Caldicellulosiruptor morganii DSM 8990 (RT8.B8), and Caldicellulosiruptor naganoensis DSM 8991 (NA10)
title_fullStr Complete Genome Sequences of Caldicellulosiruptor acetigenus DSM 7040, Caldicellulosiruptor morganii DSM 8990 (RT8.B8), and Caldicellulosiruptor naganoensis DSM 8991 (NA10)
title_full_unstemmed Complete Genome Sequences of Caldicellulosiruptor acetigenus DSM 7040, Caldicellulosiruptor morganii DSM 8990 (RT8.B8), and Caldicellulosiruptor naganoensis DSM 8991 (NA10)
title_short Complete Genome Sequences of Caldicellulosiruptor acetigenus DSM 7040, Caldicellulosiruptor morganii DSM 8990 (RT8.B8), and Caldicellulosiruptor naganoensis DSM 8991 (NA10)
title_sort complete genome sequences of caldicellulosiruptor acetigenus dsm 7040, caldicellulosiruptor morganii dsm 8990 (rt8.b8), and caldicellulosiruptor naganoensis dsm 8991 (na10)
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10019236/
https://www.ncbi.nlm.nih.gov/pubmed/36722965
http://dx.doi.org/10.1128/mra.01292-22
work_keys_str_mv AT bingryang completegenomesequencesofcaldicellulosiruptoracetigenusdsm7040caldicellulosiruptormorganiidsm8990rt8b8andcaldicellulosiruptornaganoensisdsm8991na10
AT willarddanielj completegenomesequencesofcaldicellulosiruptoracetigenusdsm7040caldicellulosiruptormorganiidsm8990rt8b8andcaldicellulosiruptornaganoensisdsm8991na10
AT maneshmohamadjh completegenomesequencesofcaldicellulosiruptoracetigenusdsm7040caldicellulosiruptormorganiidsm8990rt8b8andcaldicellulosiruptornaganoensisdsm8991na10
AT laemthongtunyaboon completegenomesequencesofcaldicellulosiruptoracetigenusdsm7040caldicellulosiruptormorganiidsm8990rt8b8andcaldicellulosiruptornaganoensisdsm8991na10
AT crosbyjamesr completegenomesequencesofcaldicellulosiruptoracetigenusdsm7040caldicellulosiruptormorganiidsm8990rt8b8andcaldicellulosiruptornaganoensisdsm8991na10
AT adamsmichaelww completegenomesequencesofcaldicellulosiruptoracetigenusdsm7040caldicellulosiruptormorganiidsm8990rt8b8andcaldicellulosiruptornaganoensisdsm8991na10
AT kellyrobertm completegenomesequencesofcaldicellulosiruptoracetigenusdsm7040caldicellulosiruptormorganiidsm8990rt8b8andcaldicellulosiruptornaganoensisdsm8991na10

Ejemplares similares