Severe Acute Respiratory Syndrome Coronavirus-2 Lambda Variant Collected from a Child from Arkansas and Sequenced

An eleven-year-old tested positive for SARS-CoV-2 Lambda variant. Sequencing was performed on the Oxford Nanopore and the Illumina NextSeq 500. Both platforms identified all 7 of the synonymous mutations in the sample, while all 28 nonsynonymous mutations were identified from Oxford Nanopore and 20...

Descripción completa

Detalles Bibliográficos
Autores principales: Wong, Lori, Randolph, Christopher, Kanwischer, Emily, Ingold, Ashton, Boyanton, Bobby L., Taylor, Jay, Frenner, Rachel A., Harley, Susan E., Bird, Jordan T., Thurman, Timothy J., Kandel, Sangam, Ussery, David W., Byrum, Stephanie D., Dinwiddie, Darrell, Domman, Daryl, Chalwadi, Uday K., Kennedy, Joshua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2023
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10019291/
https://www.ncbi.nlm.nih.gov/pubmed/36779742
http://dx.doi.org/10.1128/mra.00007-23
_version_ 1784907997916430336
author Wong, Lori
Randolph, Christopher
Kanwischer, Emily
Ingold, Ashton
Boyanton, Bobby L.
Taylor, Jay
Frenner, Rachel A.
Harley, Susan E.
Bird, Jordan T.
Thurman, Timothy J.
Kandel, Sangam
Ussery, David W.
Byrum, Stephanie D.
Dinwiddie, Darrell
Domman, Daryl
Chalwadi, Uday K.
Kennedy, Joshua
author_facet Wong, Lori
Randolph, Christopher
Kanwischer, Emily
Ingold, Ashton
Boyanton, Bobby L.
Taylor, Jay
Frenner, Rachel A.
Harley, Susan E.
Bird, Jordan T.
Thurman, Timothy J.
Kandel, Sangam
Ussery, David W.
Byrum, Stephanie D.
Dinwiddie, Darrell
Domman, Daryl
Chalwadi, Uday K.
Kennedy, Joshua
author_sort Wong, Lori
collection PubMed
description An eleven-year-old tested positive for SARS-CoV-2 Lambda variant. Sequencing was performed on the Oxford Nanopore and the Illumina NextSeq 500. Both platforms identified all 7 of the synonymous mutations in the sample, while all 28 nonsynonymous mutations were identified from Oxford Nanopore and 20 nonsynonymous mutations were identified from Illumina.
format Online
Article
Text
id pubmed-10019291
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher American Society for Microbiology
record_format MEDLINE/PubMed
spelling pubmed-100192912023-03-17 Severe Acute Respiratory Syndrome Coronavirus-2 Lambda Variant Collected from a Child from Arkansas and Sequenced Wong, Lori Randolph, Christopher Kanwischer, Emily Ingold, Ashton Boyanton, Bobby L. Taylor, Jay Frenner, Rachel A. Harley, Susan E. Bird, Jordan T. Thurman, Timothy J. Kandel, Sangam Ussery, David W. Byrum, Stephanie D. Dinwiddie, Darrell Domman, Daryl Chalwadi, Uday K. Kennedy, Joshua Microbiol Resour Announc Genome Sequences An eleven-year-old tested positive for SARS-CoV-2 Lambda variant. Sequencing was performed on the Oxford Nanopore and the Illumina NextSeq 500. Both platforms identified all 7 of the synonymous mutations in the sample, while all 28 nonsynonymous mutations were identified from Oxford Nanopore and 20 nonsynonymous mutations were identified from Illumina. American Society for Microbiology 2023-02-13 /pmc/articles/PMC10019291/ /pubmed/36779742 http://dx.doi.org/10.1128/mra.00007-23 Text en Copyright © 2023 Wong et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Wong, Lori
Randolph, Christopher
Kanwischer, Emily
Ingold, Ashton
Boyanton, Bobby L.
Taylor, Jay
Frenner, Rachel A.
Harley, Susan E.
Bird, Jordan T.
Thurman, Timothy J.
Kandel, Sangam
Ussery, David W.
Byrum, Stephanie D.
Dinwiddie, Darrell
Domman, Daryl
Chalwadi, Uday K.
Kennedy, Joshua
Severe Acute Respiratory Syndrome Coronavirus-2 Lambda Variant Collected from a Child from Arkansas and Sequenced
title Severe Acute Respiratory Syndrome Coronavirus-2 Lambda Variant Collected from a Child from Arkansas and Sequenced
title_full Severe Acute Respiratory Syndrome Coronavirus-2 Lambda Variant Collected from a Child from Arkansas and Sequenced
title_fullStr Severe Acute Respiratory Syndrome Coronavirus-2 Lambda Variant Collected from a Child from Arkansas and Sequenced
title_full_unstemmed Severe Acute Respiratory Syndrome Coronavirus-2 Lambda Variant Collected from a Child from Arkansas and Sequenced
title_short Severe Acute Respiratory Syndrome Coronavirus-2 Lambda Variant Collected from a Child from Arkansas and Sequenced
title_sort severe acute respiratory syndrome coronavirus-2 lambda variant collected from a child from arkansas and sequenced
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10019291/
https://www.ncbi.nlm.nih.gov/pubmed/36779742
http://dx.doi.org/10.1128/mra.00007-23
work_keys_str_mv AT wonglori severeacuterespiratorysyndromecoronavirus2lambdavariantcollectedfromachildfromarkansasandsequenced
AT randolphchristopher severeacuterespiratorysyndromecoronavirus2lambdavariantcollectedfromachildfromarkansasandsequenced
AT kanwischeremily severeacuterespiratorysyndromecoronavirus2lambdavariantcollectedfromachildfromarkansasandsequenced
AT ingoldashton severeacuterespiratorysyndromecoronavirus2lambdavariantcollectedfromachildfromarkansasandsequenced
AT boyantonbobbyl severeacuterespiratorysyndromecoronavirus2lambdavariantcollectedfromachildfromarkansasandsequenced
AT taylorjay severeacuterespiratorysyndromecoronavirus2lambdavariantcollectedfromachildfromarkansasandsequenced
AT frennerrachela severeacuterespiratorysyndromecoronavirus2lambdavariantcollectedfromachildfromarkansasandsequenced
AT harleysusane severeacuterespiratorysyndromecoronavirus2lambdavariantcollectedfromachildfromarkansasandsequenced
AT birdjordant severeacuterespiratorysyndromecoronavirus2lambdavariantcollectedfromachildfromarkansasandsequenced
AT thurmantimothyj severeacuterespiratorysyndromecoronavirus2lambdavariantcollectedfromachildfromarkansasandsequenced
AT kandelsangam severeacuterespiratorysyndromecoronavirus2lambdavariantcollectedfromachildfromarkansasandsequenced
AT usserydavidw severeacuterespiratorysyndromecoronavirus2lambdavariantcollectedfromachildfromarkansasandsequenced
AT byrumstephanied severeacuterespiratorysyndromecoronavirus2lambdavariantcollectedfromachildfromarkansasandsequenced
AT dinwiddiedarrell severeacuterespiratorysyndromecoronavirus2lambdavariantcollectedfromachildfromarkansasandsequenced
AT dommandaryl severeacuterespiratorysyndromecoronavirus2lambdavariantcollectedfromachildfromarkansasandsequenced
AT chalwadiudayk severeacuterespiratorysyndromecoronavirus2lambdavariantcollectedfromachildfromarkansasandsequenced
AT kennedyjoshua severeacuterespiratorysyndromecoronavirus2lambdavariantcollectedfromachildfromarkansasandsequenced

Ejemplares similares