Genome Sequence of a New Carnation Small Viroid-Like RNA, CarSV-1

Here, we report the genome sequence of a new circular viroid-like RNA (CarSV-1) derived from Dianthus caryophyllus (carnation) leaves. The CarSV-1 genome has notable sequence similarity (62%) to the well-studied CarSV viroid-like RNA and comprises the complete hammerhead consensus sequences involved...

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Autores principales: Breit, Timo M., de Leeuw, Wim C., van Olst, Marina, Ensink, Wim A., van Leeuwen, Selina, Dekker, Rob J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2023
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10019309/
https://www.ncbi.nlm.nih.gov/pubmed/36840552
http://dx.doi.org/10.1128/mra.01219-22
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author Breit, Timo M.
de Leeuw, Wim C.
van Olst, Marina
Ensink, Wim A.
van Leeuwen, Selina
Dekker, Rob J.
author_facet Breit, Timo M.
de Leeuw, Wim C.
van Olst, Marina
Ensink, Wim A.
van Leeuwen, Selina
Dekker, Rob J.
author_sort Breit, Timo M.
collection PubMed
description Here, we report the genome sequence of a new circular viroid-like RNA (CarSV-1) derived from Dianthus caryophyllus (carnation) leaves. The CarSV-1 genome has notable sequence similarity (62%) to the well-studied CarSV viroid-like RNA and comprises the complete hammerhead consensus sequences involved in self-cleavage. CarSV-1 co-occurs with carnation viruses, such as CarMV.
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spelling pubmed-100193092023-03-17 Genome Sequence of a New Carnation Small Viroid-Like RNA, CarSV-1 Breit, Timo M. de Leeuw, Wim C. van Olst, Marina Ensink, Wim A. van Leeuwen, Selina Dekker, Rob J. Microbiol Resour Announc Genome Sequences Here, we report the genome sequence of a new circular viroid-like RNA (CarSV-1) derived from Dianthus caryophyllus (carnation) leaves. The CarSV-1 genome has notable sequence similarity (62%) to the well-studied CarSV viroid-like RNA and comprises the complete hammerhead consensus sequences involved in self-cleavage. CarSV-1 co-occurs with carnation viruses, such as CarMV. American Society for Microbiology 2023-02-22 /pmc/articles/PMC10019309/ /pubmed/36840552 http://dx.doi.org/10.1128/mra.01219-22 Text en Copyright © 2023 Breit et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Breit, Timo M.
de Leeuw, Wim C.
van Olst, Marina
Ensink, Wim A.
van Leeuwen, Selina
Dekker, Rob J.
Genome Sequence of a New Carnation Small Viroid-Like RNA, CarSV-1
title Genome Sequence of a New Carnation Small Viroid-Like RNA, CarSV-1
title_full Genome Sequence of a New Carnation Small Viroid-Like RNA, CarSV-1
title_fullStr Genome Sequence of a New Carnation Small Viroid-Like RNA, CarSV-1
title_full_unstemmed Genome Sequence of a New Carnation Small Viroid-Like RNA, CarSV-1
title_short Genome Sequence of a New Carnation Small Viroid-Like RNA, CarSV-1
title_sort genome sequence of a new carnation small viroid-like rna, carsv-1
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10019309/
https://www.ncbi.nlm.nih.gov/pubmed/36840552
http://dx.doi.org/10.1128/mra.01219-22
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